Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1315 ATGAAGATGGCTTCCTCTCATCATCTCCTCATTTTGCTTCTCACCTTTTTCTTCGCATCAATTGTCAGAGCCACTCTCCCACAATATGAAGTGGAAGCTCTGAAAGACATAGCTAACGCACTTGGGAAGAAGGATTGGGACTTCCAGGCAGATCCATGCAGTGACTGGACTACAGATGGAAAAGAAAATGCTATTAAATGCAGTTGCTCTATTGCCAATGACAACTTCTGCCATGTTGTTAGCATTGACCTCACCCGCAACTACCTTAACGGTGCAATCCCTCCACAATGGGGCTCCATGATGAATCTTCTCAACATTTCTGTTCTTGGAAACCGACTTACGGGTCGAATTCCAGAGGAGCTAGGAAACATCAGCACTCTCAAAAGTTTGGTCCTCGAGTTCAATCAATTTTCTGGAAATCTTCCTCCAGCGCTTGGGAATCTTACCAACATTGAAAGACTGCATCTTACCTCCAACAACTTCACTGGACAACTGCCTCCGACATTTGCAAGGCTTACTGCATTGAAGGATGTAACGATTCAAGGGAGTGGTTTGAGTGGACCAATTCCTTCTGAAATTTTTTTTCTGGAAAACTTGTCTGACCTGAGAATAAGTGACTTGAATGGAGCTGATGCAACTTTTCCACAACTTAATGATCGGACAAAGTTGAAAACTTTGATACTAAAGAGTTGCAATATTAATGGAACGCTACCTGAAAATCTTGGGAAAATGTCCACTTTAAAAACCTTATATTTAACTGGAAACCTTCTCACTGGACCTGTGCCTAAGTGGACAGAGAATGTTGACAACATCTATATGGGGCTTAACCATCTCTTATTTTACATAGGAACTTGTTTGCAAGCTCTTCGATGGGCAATAATGCAGGAACTATTACCTGTATGGGAAGCACTGTCTGTCCTAAAATGTGTCAAAAAGAAGTTTTCTATGGGTGACTCAAAGTTTAGTGATGAGGCCTTGTACTCTCTCCACATAAATTGTGGTGGAAAGAAAAAAACCATTGGAGACACAACATATGAGGATGATTCAGATCCAGCTGGACCGGCAACATTCAAAGAGGGTGAGGGTGGAACAAACTGGGCATTCAGCAGTACTGGTCACTTTTTGGATAATGATTTCACAGACTACTATATTTCACAAAATATATCTAGGCTCTCTATGCCCGATGTTGAATTGTATACGGATGCACGTCTTTCTCCCAGTTCTCTGACTTATTATGGATTTTGCTTGGGAAATGGACAGTACACAGTGAATCTACATTTTGCGGAGATCATGTTCACCCATGATAATACATATAGCAGCCTTGGAAGGCGTGTATTTGACGTTTACATTCAGGGAAAGCAAATGCTGAAGGATTTCAATATTGCAACTGAAGCACAAGGAGTTGGTAAGGAAGTCATTAAAAAATTCCTTGTGTCTGTGACTAGAAATACATTAGAGATTCGCTTCTATTGGGCTGGAAAAGGGACAACTGCTATCCCGCATAAATCAGTATATGGTCCTCTAATATCTGCAATATCTGTCAATCCTGAATTTGAACCCCCATCAGAAAATGGAAGTAATATATCTGCAGGGGCTATTGTTGCAATTGTGGCTGCGGGAGTGATTATTGTCATCCTGTTATCTGGTATACTTTGGTGGAGAGGTTGTCTAGAAACTAAAAGTTTGTTAGCAAGAGAACTAAAGGAGCCCAGACAAATGCTGTTTAAAATTGGATTGGCCAACAAGGCAAAAGATCTGCATTGTGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTCAGTGGAAGGAGGAACACTATTCAACGGCAAAGGGAAGACTGTTTCCATCTTCTTAGTTGGGCTCATCTCTTGAAAGAGAATAGTTATCTAACGGAGCTAGTTGATCGAAGGTTGGGTTCAGATTATAACAAAGAGGAGGCAATGGTGATGATTGATGTGGCTCTCCTATGCACCAATCCCACTTCATCACTTAGGCCCGCAATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAATTGTGGTTCCAGAGTTGGTTTCAGATCAAAGTGAGGTGGCAGATAAGATGAAGTTGGAGGCAATCCGACGGTATTACCAAGAAATAGAAGAAAATCAGATGGGCGAGACTGACATTCACACCAAGAGTCTCTTAGGGCCATCAACTGGTTCGTCTACATCAGCTGCAGATCTCTATCCTATTCACCCGGATTCTTCTTACTGGGAGAAAAGAAATTAG 2307 0.4157 MKMASSHHLLILLLTFFFASIVRATLPQYEVEALKDIANALGKKDWDFQADPCSDWTTDGKENAIKCSCSIANDNFCHVVSIDLTRNYLNGAIPPQWGSMMNLLNISVLGNRLTGRIPEELGNISTLKSLVLEFNQFSGNLPPALGNLTNIERLHLTSNNFTGQLPPTFARLTALKDVTIQGSGLSGPIPSEIFFLENLSDLRISDLNGADATFPQLNDRTKLKTLILKSCNINGTLPENLGKMSTLKTLYLTGNLLTGPVPKWTENVDNIYMGLNHLLFYIGTCLQALRWAIMQELLPVWEALSVLKCVKKKFSMGDSKFSDEALYSLHINCGGKKKTIGDTTYEDDSDPAGPATFKEGEGGTNWAFSSTGHFLDNDFTDYYISQNISRLSMPDVELYTDARLSPSSLTYYGFCLGNGQYTVNLHFAEIMFTHDNTYSSLGRRVFDVYIQGKQMLKDFNIATEAQGVGKEVIKKFLVSVTRNTLEIRFYWAGKGTTAIPHKSVYGPLISAISVNPEFEPPSENGSNISAGAIVAIVAAGVIIVILLSGILWWRGCLETKSLLARELKEPRQMLFKIGLANKAKDLHCGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRRNTIQRQREDCFHLLSWAHLLKENSYLTELVDRRLGSDYNKEEAMVMIDVALLCTNPTSSLRPAMSSVLSMLEGRIVVPELVSDQSEVADKMKLEAIRRYYQEIEENQMGETDIHTKSLLGPSTGSSTSAADLYPIHPDSSYWEKRN 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1315 768 Gene3D - 325 517 - -
Glsi04g1315 768 Pfam Malectin domain 328 512 IPR021720 -
Glsi04g1315 768 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 326 517 - -
Glsi04g1315 768 FunFam Leucine-rich repeat receptor protein kinase EMS1 73 168 - -
Glsi04g1315 768 SUPERFAMILY L domain-like 47 271 - -
Glsi04g1315 768 MobiDBLite consensus disorder prediction 734 753 - -
Glsi04g1315 768 SUPERFAMILY Protein kinase-like (PK-like) 589 702 IPR011009 -
Glsi04g1315 768 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Glsi04g1315 768 MobiDBLite consensus disorder prediction 733 753 - -
Glsi04g1315 768 Pfam Protein tyrosine and serine/threonine kinase 581 646 IPR001245 GO:0004672|GO:0006468
Glsi04g1315 768 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 557 - -
Glsi04g1315 768 Gene3D Transferase(Phosphotransferase) domain 1 563 711 - -
Glsi04g1315 768 Gene3D Ribonuclease Inhibitor 182 284 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1315 Glsi-ChrGlsi04 14726368 14740180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1315 589 725 Receptor kinase-like Gene Family AT1G53420 52.482 6.79e-39 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g1315 Malectin 2.3e-42 CL0202