Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1314 ATGGTGCTCGTCTGTAGTGCACACTTGACATCATATAATATTCTTTCAGGGTTGTTTGATAAGTTAGAGCAACAGATGCAGGGGTCTCCACTACAAATGTCAGAGGAGACTGATCTTTTAAAAAGTGAAGTAGAGCAGGTGCAATCCAACTTTTTTTGTGTGGCGGTGCAGAGTGAAGTAGGGCAGAGAGTGAGTGCTGTCGGGGGTCGTTCCAGCCTGGGTCTGGGAATCAGAGCTCGCTCTTCTGTTGCTTTGGATCTTGCTGGTCAAAGTCCGATGAAAACTCTCCAAGCAATATCATCTAAGATTAAGAACTTGAATTGGAGGGTTACCTCCCGTTCTTGCAATGGGGATGGAGGATTCAAAAACAAAACTATTTTAGGGAATGACATAATAAGGAATATCACCTGCAGTTGCACTTTCCAAAGTGGCACCATTTGCCATGTCACAAACATCCAGCTGAAGGGTCTCAATCTATCTGGAGTTTTGCCTGGTGAATTTGGAAATCTCAGCCACCTGAAAGAACTTGATTTCTCTCGCAACTTTCTCAGTGGAACAATTCCAACGAGTTTTGCTCGCCTTCCTCTGATCATTCTGTCCCTTCTGGATAATCAAATCAGTGGTTCAATTCCGAAGGAAATTGGTGATATTGCCAGTTTGGAGGAGCTGATCTTGGAAGATAATCTGTTAGAAGGAACTCTTCCTCCCAATCTTGGAAATCTGAAGCGGTTACGGAGATTACTTCTTTCTGCAAATAATTTCTCAGGGACAATACCAGAAACTTTTGGCAACCTAAAGAAACTAAAAGATTTTAGGATAGATGGAAGCAGAATGTCAGGAAAAATACCCAGTTTTATCGGGAATTGGACCAAACTTGGAAGACTAGATCTGCAGGGCACATCCCTGGAAGGTCCAATTCCTCTCACCATAGCAAAGATGACGAATTTGACTGAACTGAGAATAACTGATTTGAATGGACCAACTATGAAATTTCCTGATCTGGAGAATTTGAAAACCCTGAAACATTTGGTGTTGAGAAATTGCTCAATTACTGGTCCCATTCCAGATTACATCGGTCAAATGGAAAGCTTAGTTACTCTAGACCTGAGCTTCAATAGGTTGACTGGTAAAATCCCAGAAACAATAGAGAGCTTGGCAAAGCTAGATTATATGTTTTTAATTGACAATTCTTTGAGTGGAGAAATTCCAGGATGGGTACTGAACAACAAAAATAACATCGATTTATCTTACAATAATTTTTCAGCATCTTCTGCTGCTACTTGTCAGCTCAAGGATGTGAACTTGGCTTCCAGTCTTTCATCTTCAGCAAACAGCTCAGCTACCTGGTGCTTGTTAAAGGACCTCCCTTGTGGAGGAAAACCCGAGTATCATTCATTGTTCATAAACTGTGGAGGATCTGAAATAAAATTTGAGGGGAATCAATATGAAAAGGACCTCAACCCAGAGGGCACATCAAACTTTGTTCTTAAAGATGACAAATGGGCTTATAGCAGCACAGGAGTATATATGGGAAAAGCTAAAGCTGATTACGTAGCAACAAATACATTTTCTCTAAATATTACTGGTCCTGAATATTACCAAACAGCCCGCCTTTCCCCTATGTCACTTAGGTATCTTGGCCTTTGTATGCTTAAGGGAAATTATAAAGTGAAGCTCCACTTTGCTGAGATAATGTATTCTGATGATCAGACATTTAGCAGCCTTGGAAGGCGTATATTTGATGTTTCAATTCAAGGTACGAAATATTTGAGCAATTTTAACATTATGAAGGAAGCTGGTGGCGTTGGCAAGGGAATTACCAAGGAATTTGATGTTCAAATTAATGATAGCACCTTGGAGATCCATTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCTGACAGAGGGGTATATGGACCTCTTATATCTGCTATTTCAGTTACTCCAAACTTTAAAATTCCTTCAAAAGGGCTGTCTGCCGGAGCTATTGCTGGAATTGTGGCTGGATCATGTGTGTTCATCATACTGATAATGGCTGTCCTTCGAAAGACAGGTTTTCTTGGTGGGGAAAATAAAAAAGACAAAGAACTTCTAGATCTGAAAACGGGTTATTTCACTTTAAGACAAATTAAAGTTGCCACTGATAACTTTGACCCAACAAATAAGATAGGCGAAGGAGGTTTTGGGCCAGTGTACAAGGGTGTATTGCCAAATGATGCTGCCATTGCTGTCAAGCAGCTCTCCTCAAAATCAAAGCAAGGGAACCATGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTTTGGCTGCTGCATTGAAGGAAATCAGTTGTTGCTAATATATGAATACATGGAGAACAATAGTCTGGCTCGTGCACTTTTTGGTCATCAAGAACAGAGGTTACATTTGGACTGGCCCACAAGAATGAAAATCTGTGTGGGGATAGCCAGGGGACTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTACACAGGGACATTAAGGCAACAAATATCTTACTTGATAAGGATTTGAATGCCAAAATCTCTGACTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAATACCCATATCAGCACTAGAATAGCAGGAACAATTGGTTACATGGCTCCTGAATATGCTATGCGGGGTTACTTGACTGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTAGAGATTGTTAGCGGAAAAAGCAACGCAAATTACAAGCCAAAGGAGGAATTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAATCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCTCAGAGGAAGCCATGAGAATGCTAGAGTTGTCGCTCTTATGCACCAATCCATCTCCCACTCTTAGACCATCAATGTCATCTGTAGTTAGCATGCTTGAAGGAAAATCTCCGATCCAACCACCGATAATTAAGCGCCAGGATGCAAGATTCAAAGCCTTCGAGATGCTATCACAAGACAGCCAAGCGTTTGTTTCCTCTACATTTTCACAAGAAAGCATAGAGCAAAGAGCCAAATCAATGGATGGGCCATGGGTTGACTCCTCCATATCTCTTCCAAGTAAAGATGATTTTTCTGCTTCCGGTAGGCTTTTGAATTCACAAGATGTATGA 3201 0.4083 MVLVCSAHLTSYNILSGLFDKLEQQMQGSPLQMSEETDLLKSEVEQVQSNFFCVAVQSEVGQRVSAVGGRSSLGLGIRARSSVALDLAGQSPMKTLQAISSKIKNLNWRVTSRSCNGDGGFKNKTILGNDIIRNITCSCTFQSGTICHVTNIQLKGLNLSGVLPGEFGNLSHLKELDFSRNFLSGTIPTSFARLPLIILSLLDNQISGSIPKEIGDIASLEELILEDNLLEGTLPPNLGNLKRLRRLLLSANNFSGTIPETFGNLKKLKDFRIDGSRMSGKIPSFIGNWTKLGRLDLQGTSLEGPIPLTIAKMTNLTELRITDLNGPTMKFPDLENLKTLKHLVLRNCSITGPIPDYIGQMESLVTLDLSFNRLTGKIPETIESLAKLDYMFLIDNSLSGEIPGWVLNNKNNIDLSYNNFSASSAATCQLKDVNLASSLSSSANSSATWCLLKDLPCGGKPEYHSLFINCGGSEIKFEGNQYEKDLNPEGTSNFVLKDDKWAYSSTGVYMGKAKADYVATNTFSLNITGPEYYQTARLSPMSLRYLGLCMLKGNYKVKLHFAEIMYSDDQTFSSLGRRIFDVSIQGTKYLSNFNIMKEAGGVGKGITKEFDVQINDSTLEIHLYWAGKGTTAIPDRGVYGPLISAISVTPNFKIPSKGLSAGAIAGIVAGSCVFIILIMAVLRKTGFLGGENKKDKELLDLKTGYFTLRQIKVATDNFDPTNKIGEGGFGPVYKGVLPNDAAIAVKQLSSKSKQGNHEFVNEIGMISALQHPNLVKLFGCCIEGNQLLLIYEYMENNSLARALFGHQEQRLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNANYKPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSSEEAMRMLELSLLCTNPSPTLRPSMSSVVSMLEGKSPIQPPIIKRQDARFKAFEMLSQDSQAFVSSTFSQESIEQRAKSMDGPWVDSSISLPSKDDFSASGRLLNSQDV 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1314 1066 Gene3D Ribonuclease Inhibitor 225 326 IPR032675 -
Glsi04g1314 1066 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 332 423 - -
Glsi04g1314 1066 Gene3D Ribonuclease Inhibitor 327 438 IPR032675 -
Glsi04g1314 1066 CDD STKc_IRAK 724 991 - -
Glsi04g1314 1066 MobiDBLite consensus disorder prediction 1031 1066 - -
Glsi04g1314 1066 ProSiteProfiles Protein kinase domain profile. 718 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1314 1066 Gene3D Transferase(Phosphotransferase) domain 1 794 1002 - -
Glsi04g1314 1066 SUPERFAMILY L domain-like 141 421 - -
Glsi04g1314 1066 Gene3D Phosphorylase Kinase; domain 1 687 793 - -
Glsi04g1314 1066 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 689 793 - -
Glsi04g1314 1066 SUPERFAMILY Protein kinase-like (PK-like) 703 990 IPR011009 -
Glsi04g1314 1066 Gene3D - 464 651 - -
Glsi04g1314 1066 SMART serkin_6 718 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g1314 1066 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 89 325 - -
Glsi04g1314 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Glsi04g1314 1066 Pfam Malectin domain 466 646 IPR021720 -
Glsi04g1314 1066 MobiDBLite consensus disorder prediction 1048 1066 - -
Glsi04g1314 1066 FunFam Putative LRR receptor-like serine/threonine-protein kinase 794 1001 - -
Glsi04g1314 1066 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 95 1022 - -
Glsi04g1314 1066 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 463 651 - -
Glsi04g1314 1066 Pfam Protein tyrosine and serine/threonine kinase 722 987 IPR001245 GO:0004672|GO:0006468
Glsi04g1314 1066 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Glsi04g1314 1066 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515
Glsi04g1314 1066 Gene3D Ribonuclease Inhibitor 93 221 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1314 Glsi-ChrGlsi04 14692931 14712841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1314 83 1052 Receptor kinase-like Gene Family AT1G53440 62.135 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi04g1314 PK_Tyr_Ser-Thr 5.5e-50 CL0016