Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1255 ATGGCCTCCTCCAAGGACCGCGAGAACTTTGTCTACATCGCCAAGCTAGCTGAGCAAGCTGAGCGTTATGATGAAATGGTGGATGCAATGAAAAAAGTGGCAAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGAAACTTGTTTTCCGTTGGGTACAAAAATGTTGTTGGAGCCCGGAGAGCATCATGGAGGATCTTGTCATCGATAGAGCAGAAGGAGTCGTCAAAAGGGAATGATTTGAATGTTAAGCATATCAAGGATTACAGGCAAAAAATGGAGTCGGAGCTGAGCAACATTTGCAGTGATATTATGATAATACTAGATGAGCATCTTATCCCATCCACTAATTTTCCAGAGTCCACTGTATTCTACTACAAGATGAAAGGAGACTATTACCGTTATTTAGCAGAGTTCAAAGCTGGTGATGAGAAGAAAGATGTAGCAGATCAGTCACTCAAAGCATATCAGATGGCTTCTAACACTGCTGAGACTGAATTGCCTCCTACACATCCCATCCGATTGGGTTTGGCTCTAAATTTCTCAGTGTTTTATTATGAAATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCCTTTGATGAAGCTGTCTCAGAGCTGGATTCTCTGAGTGAAGAGTCTTACAAGGATAGTACTTTGATTATGCAGCTGTTGAGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGAAGACCATAAGATGGAAAGCACTGCTAGGAGTGGTACAGGGGATGATGAGTGA 780 0.4282 MASSKDRENFVYIAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGARRASWRILSSIEQKESSKGNDLNVKHIKDYRQKMESELSNICSDIMIILDEHLIPSTNFPESTVFYYKMKGDYYRYLAEFKAGDEKKDVADQSLKAYQMASNTAETELPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAVSELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDHKMESTARSGTGDDE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1255 259 MobiDBLite consensus disorder prediction 238 259 - -
Glsi04g1255 259 MobiDBLite consensus disorder prediction 237 259 - -
Glsi04g1255 259 Coils Coil 13 33 - -
Glsi04g1255 259 Gene3D - 1 249 IPR036815 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Glsi04g1255 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Glsi04g1255 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Glsi04g1255 259 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Glsi04g1255 259 FunFam 14-3-3 protein epsilon 2 248 - -
Glsi04g1255 259 PIRSF 14-3-3 1 247 IPR000308 -
Glsi04g1255 259 SMART 1433_4 7 248 IPR023410 -
Glsi04g1255 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Glsi04g1255 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1255 Glsi-ChrGlsi04 12916783 12921000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1255 1 259 14-3-3 family AT2G42590 74.713 1.86e-149 416