Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1251 ATGCCCTCACCTCACTCTTCCCAATTTATACCCTGCAAACACTTCTTCCAAAACGGGCCTGCTTTGCTCCGAAGCAACCTATCCCACCCATGGATTCCCCCTCAAGCGCTTGACGTTTTGATACCTAAGATGATGTCTGACGCCCAGCGGCTCTACCAGAACCAGCGTCGTCCTTATGTCTCTGTGTACCCTTTGGCTCTGGATGTTATCGTCGAAATTCCAGAAACTGATGAGACTGTGGCCGAAATCGAAAGGGTCACGTGGGCATCCATGCAAGAAGTCAGAATGGTTCCTGCATCCGAGGAAGCCATCCGGTCGCTCAACCCAGTGAAGCTTCAACAAAACGTTGCTGATACCAACCAATGCTGCATATGTCTGGAACAGTTCGAGGACGGCGCGAAGGTTTCGGCAATGCCCTGCCACCATGTTTATCACAATGATTATAGAATGTTTCGAGGAACCATGGCCCCCGGGTTTGCTTTAGAGGGATATTTCCAGAAAACCTCTGCACACAAATCCTTTCCCCTGCACCTTGTTCGTGTTCGCTGCCCACTGAAACAAGTTATGAAACTTTTTGCTCCTTCTTCAGTACAAGCTTCTATTTCTCTATTGCAGATTTTGTATTAG 627 0.4848 MPSPHSSQFIPCKHFFQNGPALLRSNLSHPWIPPQALDVLIPKMMSDAQRLYQNQRRPYVSVYPLALDVIVEIPETDETVAEIERVTWASMQEVRMVPASEEAIRSLNPVKLQQNVADTNQCCICLEQFEDGAKVSAMPCHHVYHNDYRMFRGTMAPGFALEGYFQKTSAHKSFPLHLVRVRCPLKQVMKLFAPSSVQASISLLQILY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1251 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 154 IPR013083 -
Glsi04g1251 208 SUPERFAMILY RING/U-box 104 146 - -
Glsi04g1251 208 Pfam RING-like zinc finger 121 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1251 Glsi-ChrGlsi04 12840429 12841421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1251 82 147 C3H Transcription Factor Family AT1G18760 33.333 7.74e-08 49.3