Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1223 ATGGTGGTTTGGCTATTTGTGGCACTAACCATAACACAGACTTACACAGCTAACCTTGCCAGCATGCTGACCATAGAACGCCTTGAACCAGCTTTTCAAAATGTTGATCAGTTACGAAACAGCCATGCCATGGTTGGACACCTTAAAGGCTCCTACCTTAGTAAATATCTGCAGAAACTATTACACTTCCATCCTGAAAATATCAAGCAATTTGAGTCGCTGGAAGAATATGCTGAAGCCCTCAGAATGAAAGAAATAGCAGCTGCCTTCCTTAGTGCTCCTAGAGCCAAAGTTTTCCTTGCAATGTATTGTAATGAGTTTATTCAGGCTGGGCCTATGTACAAGATGGGAGGATATGGATTTGTACTACTTCAAACGCATTTCCAAAGGGATCTCCATTGCTTCCTAGTTCCTAGTTTAAACAAAGCTCTGCTAGAGGTATCTGAAAGTGGGCAGCTACGTGATCTTGAAAACAAGATGCTTGTAGCAGAGGAATGCCTAGACGAAGAAAAACCAGGCGAAGATAAGAAAACCACAAGTCTTCATCCAAACAGTTTCTGGGCACTCTTTACCTTTACAGCGTGCACATCAACAATCGCTCTCTTGGGTTACATCTTTCAGAACACGGATTCAATCCTCAGAAAGACGTCAATTCAGAAAATAATGGTGGCTATGGTTAGATACTGGCGATCTCAAAGGAGACAGTTCTCAAGAAGAGTCAGCAATACAGACAGTCCCACAGACTCTCCAAAAACATTTGATTTGCCAACTCCATCCTGA 780 0.4244 MVVWLFVALTITQTYTANLASMLTIERLEPAFQNVDQLRNSHAMVGHLKGSYLSKYLQKLLHFHPENIKQFESLEEYAEALRMKEIAAAFLSAPRAKVFLAMYCNEFIQAGPMYKMGGYGFVLLQTHFQRDLHCFLVPSLNKALLEVSESGQLRDLENKMLVAEECLDEEKPGEDKKTTSLHPNSFWALFTFTACTSTIALLGYIFQNTDSILRKTSIQKIMVAMVRYWRSQRRQFSRRVSNTDSPTDSPKTFDLPTPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1223 259 SUPERFAMILY Periplasmic binding protein-like II 11 159 - -
Glsi04g1223 259 MobiDBLite consensus disorder prediction 237 252 - -
Glsi04g1223 259 Gene3D - 1 74 - -
Glsi04g1223 259 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 208 IPR015683 -
Glsi04g1223 259 MobiDBLite consensus disorder prediction 237 259 - -
Glsi04g1223 259 Pfam Ligand-gated ion channel 1 195 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1223 Glsi-ChrGlsi04 12283069 12283927 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1223 1 205 Ion Channels AT5G11180 33.953 1.39e-28 112