Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1211 ATGGCACAGTTACCTCCTAAAATACCAACCGTCACCCAAAATTGGCCATCTTTTCCTCACCAAAAAATACACACAATGGCAAGTTTCATACCCTCTGCCGCCACCAGTGGCACTGCTCAACAACCACCCCCACAACAACAAGTGCCGACATGGGTTGATGAGTTTCTCGACTTCTCGTCGGCCCGGCGGGGGGCTCATCGGCGGTCCGCCAGTGACTCTGTTGCATTCCTCGAGACGGCATTCCTAGAGGAATGCCGAAACTCGACCGCCACCATGATGATGATGCCCGGAACCCATCATCATGGGTTCGATGGGCTGGATGACGACCAGCTCATGTCGATGTTCTCCGACGATGTCGGTTCTGTCTCTCTGCCACCCTCATCTGCCACCGCGTCGTTGTCAAACCCGTCCACCCCATCCGACCAAAATAGTAATAACGACGAGAAGCCAATGGCAGTCGACGACGTCGTCCCAACACATGACCATCAGCAGCAGCAACAGCCCAAGAATGAACCAGGGGAGGCGGAAAGCGCACGTAAGAATGAGAGTGACACACCACTGCCGCCGCCACCCTCGTCCGCCACCTCCGGCAACGATGAACCTATCATCGACCCCAAAAGGGTCAAAAGAATTTTGGCTAATCGGCAATCAGCTCAGAGGTCCAGGGTGAGAAAGCTACAATACATTTCTGAGCTAGAAAGAAGCGTATCATCATTGCAGAATGAGGTATCAGCATTGTCGCCAAGAGTTGCATTCTTGGACCACCAACGTTTGATTCTGAATGTGGACAATAGTGCCTTAAAGCAACGGATTGCTGCTTTGGCTCAAGAGAAGATTTTCAAAGATGCTCATCAAGAAGCTCTAAAGAAGGAAATAGAGAGACTAAGGCAAATCTATCAGCAACAGAACCTACAGAAGATGGAGAAATCATCAGTGAACAACAACAATATTGCCCATTCTCTTCATTCACCGCCACCACCATCACACCCCAAGGAGCAGCTCCTCAGTTGA 1011 0.5084 MAQLPPKIPTVTQNWPSFPHQKIHTMASFIPSAATSGTAQQPPPQQQVPTWVDEFLDFSSARRGAHRRSASDSVAFLETAFLEECRNSTATMMMMPGTHHHGFDGLDDDQLMSMFSDDVGSVSLPPSSATASLSNPSTPSDQNSNNDEKPMAVDDVVPTHDHQQQQQPKNEPGEAESARKNESDTPLPPPPSSATSGNDEPIIDPKRVKRILANRQSAQRSRVRKLQYISELERSVSSLQNEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQEKIFKDAHQEALKKEIERLRQIYQQQNLQKMEKSSVNNNNIAHSLHSPPPPSHPKEQLLS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1211 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Glsi04g1211 336 MobiDBLite consensus disorder prediction 117 204 - -
Glsi04g1211 336 CDD bZIP_plant_RF2 207 257 IPR044759 GO:0003700|GO:0006355
Glsi04g1211 336 Gene3D - 205 278 - -
Glsi04g1211 336 MobiDBLite consensus disorder prediction 305 322 - -
Glsi04g1211 336 Pfam bZIP transcription factor 206 251 IPR004827 GO:0003700|GO:0006355
Glsi04g1211 336 Coils Coil 281 305 - -
Glsi04g1211 336 FunFam Basic leucine zipper 61 205 278 - -
Glsi04g1211 336 MobiDBLite consensus disorder prediction 305 336 - -
Glsi04g1211 336 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Glsi04g1211 336 SUPERFAMILY Leucine zipper domain 206 260 IPR046347 GO:0003700|GO:0006355
Glsi04g1211 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 256 IPR004827 GO:0003700|GO:0006355
Glsi04g1211 336 PANTHER BASIC LEUCINE ZIPPER 34 1 329 - -
Glsi04g1211 336 MobiDBLite consensus disorder prediction 117 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1211 Glsi-ChrGlsi04 11949002 11951558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1211 1 284 bZIP Transcription Factor Family AT3G58120 52.188 2.44e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi04g1211 bZIP_1 1.3e-09 CL0018