Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1177 ATGGTGGGCTCAGCAGCATCAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCACTTCATGAGGCCCTCAGAAGCGTCTGTCTCAACTCAGACTGGACTTACTCTGTTTTCTGGACCATCCGTCCTCGCCCAAGAGTGAGAGGTGGTAATGGGTGCAAGGTTGGAGACGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTCTGCCGAGGAAGGGTTTCAGATTGTCTGGAAGAAATTGATGGAGAAGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTGCATCTGATAAGTGCCACAAATGGGTATTTAAAGAGCCTACAGAGTGTGAACCAAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCGGAATGGACCGACCAGTTTGAATCAGGCATTCAGACAATCGCTGTAATTCAAGCTGGGCATGGCCTTTTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTCGTGCTGAGAATGAGGCACACATTTGAATCCCTGGGCTACCAATCTGGGTTCTACCTCTCGCAGCTCTTCTCTTCCACGAGGAACACTTCGTCTTCAATGTCAATCCCTTCAAAACCTTCTACCACCACCATTCCCGTTCGTCCTGCTCCTCCACTCTTCAACTGGAATACCCAGAGGCCACTCGCTACTGCAACCTCACTCCTATCCTCGCCCACTTTCCACCATCATCGCGCACAAGCAGCAAGACTGGGTTTCCCACCACAAACCAAAGACGAAACCCACATGTTCCTCCAAATGCCTCACAATTCCGAAGAGATGATGGGTGGGGATCACGAAAACGACATCAAATGGCCGAATGGGTTGTCTTTTTTCAACGCCCTAACTGGACGAACCGATGACGCTAAGCTTCTGTTCAACCCAGAGAGCTTAGGAAGCAAAATAGGGGATCTAAATCCAAACCTCAATTCAGATTCTGGTGGTGGTGGGAATCCCAGTGAATTCTTGAGCTTGGACAGTCATAGCCACCCAGAAAATGCAATAAAAATGGACAAGTTTAAGAGGAGCTTCACTCTTCCTAGTAGAGTGGCTGCTTCGTCGTCGTCGTCTTCTACTTCAATGGATCATCATCCGGTGGAGTATAGGAATTCGGAAGGAGGAGGAGGAATGTACGCGGATGTTATGGAGACATTTTTGGAGTGA 1242 0.4799 MVGSAASASDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSMSIPSKPSTTTIPVRPAPPLFNWNTQRPLATATSLLSSPTFHHHRAQAARLGFPPQTKDETHMFLQMPHNSEEMMGGDHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGSKIGDLNPNLNSDSGGGGNPSEFLSLDSHSHPENAIKMDKFKRSFTLPSRVAASSSSSSTSMDHHPVEYRNSEGGGGMYADVMETFLE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1177 413 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 189 IPR025610 -
Glsi04g1177 413 MobiDBLite consensus disorder prediction 326 353 - -
Glsi04g1177 413 MobiDBLite consensus disorder prediction 327 353 - -
Glsi04g1177 413 PANTHER GB|AAF34833.1 1 413 IPR044170 -
Glsi04g1177 413 MobiDBLite consensus disorder prediction 377 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1177 Glsi-ChrGlsi04 10923732 10926716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1177 22 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.343 7.03e-21 93.2