Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1176 ATGACTGGCAGAGAAATTCTCCATAAAATGAAGGAAAAAGTTGGATTGTTTTCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGAGCATAACTCATGGCTTTCACCTGGTAAAGGGAAGATCAACTCATGCCATGGAAGACTATCTTGTTGCACAATTTAAGCTAGTTGATGGACATGAATTGGGTTTGTTTGCAATATTTGATGGCCACATGGGTCACGGTGTGCCTGATTACTTAAAGTCTCACTTGTTTGATAATATCTTAGAAGAGCCTGACTTCTGGACAGAAACTGGAAATGCTGTCAGGAGAGCATATACTAGAACTGATTCTACCATTTTAGAGAAAGCAGTTGAATTGGGTAAAGGGGGGTCAACTGCAGTTACGGCAATATTGCTTGATTGTCACAAGCTGGTAATAGCTAATGTTGGGGATTCAAGGGCTGTCATATGCAAAAATGGTGTGGCTAAACAACTATCAGTGGATCATGAGCCAAGCATAGAAAGGGAGGATATTGAAAACAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTGCCGCGTGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAGCACCTAAGTTCAGAGCCATATGTGACAGAGGAGATTATAGAGGATGACACAGAGTTTGTTGTATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATATTATCAGAGATATAAAGGATGCTCGGTCAGCAGCAAAGCATCTTACTGAAGAGGCACTTATCAGGAAGAGCACAGATGATATCTCCTGCATTGTTGTGAAGTTTCAGTGA 849 0.4146 MTGREILHKMKEKVGLFSDPDSGKGKSKMSKSITHGFHLVKGRSTHAMEDYLVAQFKLVDGHELGLFAIFDGHMGHGVPDYLKSHLFDNILEEPDFWTETGNAVRRAYTRTDSTILEKAVELGKGGSTAVTAILLDCHKLVIANVGDSRAVICKNGVAKQLSVDHEPSIEREDIENRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTEEIIEDDTEFVVLASDGLWKVMSNQEAVDIIRDIKDARSAAKHLTEEALIRKSTDDISCIVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1176 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Glsi04g1176 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Glsi04g1176 282 CDD PP2Cc 35 281 IPR001932 -
Glsi04g1176 282 SMART PP2C_4 24 279 IPR001932 -
Glsi04g1176 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Glsi04g1176 282 PANTHER PROTEIN PHOSPHATASE 29 281 IPR015655 GO:0004722|GO:0006470
Glsi04g1176 282 Gene3D - 18 282 IPR036457 -
Glsi04g1176 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1176 Glsi-ChrGlsi04 10908101 10913031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1176 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.433 6.50e-161 447