Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1167 ATGGAGTTCCGGAGACCTCCCTGTATCTTCCTGGTTCTTCTTAGCCTTCTCTCTTATACTCATGCTTATATATTCTACGCTGGTGGAGGAGATGGATGGGTTTTGCACCCTTCTGAGGAGTACAATCACTGGGCTGAAAGAAACAGATTCCTTGTCAATGATACTATAGTTTTTAAGTACAAGACAGATTCTAATTCGGTCTTGGTGGTGAATAAGGACGATTACGACAAGTGCAACACGAAGAACCCGCTAAAGAAATTTGAATATGGTGATACAGAATTCAAGTTTGATCGATCGGGTCCTTTCTACTTCATCAGTGGGAAAGATCATTACTGTAAAAAGGGTCAGAAATTGATCGTTGTGGTTTTAGCTGTGAGAGGACCAAAACCTCAGTGTCCACCAAAAGCTCCTTCCCCTGTTTCGCCATCCCCTATTTCTCAGCCTCCGACGGCAGCGCAGCCACCATATGGGTCTCCGGTTTCGCCACCCACCGCGCCATCGCCGGCTGGTATTCCTCCATCAAAATCACCATCTCAGGCACCGTCGCTATCTCCCTCATCTCCGTCTCCAGCGAGCAGCCCTCCAGCAGTTTCGCCGGCGCCTGCCAATGCTCCTTCCTACCCAACTCCTGAGTCTGCTCCGTCACCGGCAACGACATCACCATCACCATCACCATCATCATCGCCGTCTCCAGCGAGCAGCCCTCCAGCAGTTTCGCCGGCGCCAGCCAATGCTCCTTCCTACCCAACTCCTGAGTCTGCTCCGTCACCGGCAACGACATCACCATCACCATCCCCATCAGCCACCACTCCAGCTTATACCCCGAGTTCATCGCCGTCTCCTTCAACAAATCCCCCTCAGGCGTCGCCACCGGCGCCTCCGGCAGCCACTCCGTCACCATCGTCTTCGACCCCAGGACCATCTGGAACACCCGCGGCGAGCCCGGGAGGCTCTGCAAACCCGTCGTCATCGAATGAAACGGCACCGTCTCCACCAAATAGGGCATCATCTGCGTGGGCTCCAACTCCTTCAAGCTTAATGGTGTACTCAGTTACCATAGTGCTTGGCTCTGCTCTAAGTGCCATTTTGGGAGCACCGTAG 1101 0.5332 MEFRRPPCIFLVLLSLLSYTHAYIFYAGGGDGWVLHPSEEYNHWAERNRFLVNDTIVFKYKTDSNSVLVVNKDDYDKCNTKNPLKKFEYGDTEFKFDRSGPFYFISGKDHYCKKGQKLIVVVLAVRGPKPQCPPKAPSPVSPSPISQPPTAAQPPYGSPVSPPTAPSPAGIPPSKSPSQAPSLSPSSPSPASSPPAVSPAPANAPSYPTPESAPSPATTSPSPSPSSSPSPASSPPAVSPAPANAPSYPTPESAPSPATTSPSPSPSATTPAYTPSSSPSPSTNPPQASPPAPPAATPSPSSSTPGPSGTPAASPGGSANPSSSNETAPSPPNRASSAWAPTPSSLMVYSVTIVLGSALSAILGAP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1167 366 CDD OsENODL1_like 23 123 IPR041846 -
Glsi04g1167 366 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Glsi04g1167 366 SUPERFAMILY Cupredoxins 21 123 IPR008972 -
Glsi04g1167 366 MobiDBLite consensus disorder prediction 130 342 - -
Glsi04g1167 366 FunFam Early nodulin-like protein 1 22 127 - -
Glsi04g1167 366 Gene3D - 22 126 IPR008972 -
Glsi04g1167 366 MobiDBLite consensus disorder prediction 130 264 - -
Glsi04g1167 366 PANTHER BLUE COPPER PROTEIN 24 209 IPR039391 GO:0009055
Glsi04g1167 366 MobiDBLite consensus disorder prediction 306 342 - -
Glsi04g1167 366 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Glsi04g1167 366 MobiDBLite consensus disorder prediction 278 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1167 Glsi-ChrGlsi04 10814813 10816009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1167 10 363 Phytocyanin Superfamily AT5G53870 39.946 1.81e-48 166