Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1110 ATGGGAGTTCCTGAGACAGACCCGCTTTCGCAACTGAGTTTACCTCCGGGTTTTCGGTTTTATCCGACCGATGAGGAGCTTCTGGTTCAGTATCTGTGCCGGAAAGTAGCTGGGCACCATTTTTCTCTGCAAATCATAGCTGAAATCGACTTGTACAAGTTCGACCCATGGGTTCTACCAAGCAAAGCGATTTTCGGTGAAAAAGAATGGTATTTTTTTAGCCCGAGAGACCGGAAATACCCGAATGGTTCTCGACCCAACAGAGTTGCCGGGTCGGGGTACTGGAAAGCCACCGGAACCGACAAAATCATCACCACTGAAGGCCGAAAAGTTGGCATTAAAAAGGCTCTTGTTTTCTACGTTGGTAAAGCGCCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTTGACTCTTCCAGAAAGAACGGTAGCACCAAGCTTGATGATTGGGTTCTTTGTCGGATATATAAGAAGAACTCGAGCTCCCAGAAGGCTATTCCAAGCCTTTCGAGCATAGAATACAGCAACGGGTCTTCATCTTCCTCGTCGTCCCACTTTGACGACGTGCTCGAATCTTTGCCGGAAATCGAAGACCGGTTCTTCGCTCTGCCGCGAGTAAACTCGCTCAAAACACTACAACAGGAAGAGAAGCTGAGTTTCCCGAATCTGGGCACTGGGAATTTTGCGGACTGGGCTAACTCGGGGGTTCTTAACTCGGTGAACGAGTTCGTATCGGGGAATCAAGCACAGAGCCAAACTCAGGGGATGGTGAATTACAACCCTGGTAATGACCTTTGTATTCCTTCGATATCGGCGCTCGGTGATGTGGACACGACGGCGCCAGATGAAGAGGTTCAGAGTGGGGCGAGAACCCAAACTCAAACCCAACGGGTTAATAATTCGGGCGGGTATTTTCAGCCCATTCATTCTAATGTGTTCTCACAGGGATTCTCGAACTCCTTTGACCAGTATGGATTTCGGTACCCGAATCAGTCAGTCGGGTTCGGACTCGGACAATGA 1032 0.4922 MGVPETDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNGSTKLDDWVLCRIYKKNSSSQKAIPSLSSIEYSNGSSSSSSSHFDDVLESLPEIEDRFFALPRVNSLKTLQQEEKLSFPNLGTGNFADWANSGVLNSVNEFVSGNQAQSQTQGMVNYNPGNDLCIPSISALGDVDTTAPDEEVQSGARTQTQTQRVNNSGGYFQPIHSNVFSQGFSNSFDQYGFRYPNQSVGFGLGQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1110 343 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Glsi04g1110 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 241 - -
Glsi04g1110 343 FunFam NAC domain-containing protein 72-like 23 167 - -
Glsi04g1110 343 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Glsi04g1110 343 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Glsi04g1110 343 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1110 Glsi-ChrGlsi04 10059829 10061049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1110 1 251 NAC Transcription Factor Family AT4G27410 66.912 3.73e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi04g1110 NAM 6.7e-37 No_clan