Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1079 ATGGGCATGCCGGAGCTATTCAAGTGGACGCCTTTTGTTTTAGCTTTTCTTCTAAACATGGGTAATGAATCCTTTGCCTCATTTACTCCTGTTGACAATTACTTGCTCGCCTGTGGTTCTTCCAGGAATATAGTCTTCCAGGGTAGGACTTTTGCTCCTGACTCTGACTATAATCTCTTATTGGAAACCGAGAAATCTGTTACAGTTGACTCTAAATCAAGTGTCCCGTTTCCAGTTCATCAGTCAGCTCGAGTCTTCTGGGGCAGATCTTCATATACATTCAGAATTGAGAAACAAGGCTGGCACTGGATCCGTCTTTACTTTTACCCTATACCAAACTTGAACCAGAACTTGTCCTCTGCCTCAATAGCAGTAGTAGCTGATAGTTTTGTCCTTCTCAACAATTTCACTTTCATAAAGTATGGTGGTTCTCACTTGTTCAAGGAGTATGCAATCAATATTGCATCTCCTACCTTGTCTCTCACATTCGTACCTTCTAGCAATTCATTTGTCTTTGTCAATGCAATCGAAGTTGTCTCAATACCAGATGAGCTCTTTTCTCATCGAGCAATAGCTCTAAATTCTTCTTCCCCATTTGACCTTTCAAGATTGGCCCTAGAAACAATTTACCGGGTGAACATGGGGGGTCCTTTGCTTACTGCCCAAAATGACACCCTTGGAAGGACTTGGGTGAATGATCGTAAATACCTCCCTCTGAACAGTTCTGTCCTTAATGTTTCAGTCAGCCCTGCAAGCATCAAGTATCCAGCAGCTGTTACACCTGAGATAGCCCCAAATTGGGTTTATGCCACTGGAGAAACGATGGGTAATGCAAATGTAGCCCAAAATAATTTCGGCATTACTTGGGTCTTCCATGTGGATCCAAACTTCTCCTATTTTATTCGGGTGCACTTTTGTGATATTATGAGCAAGTCCCTCAACAGTTTATTGTTCAATCTATTCATAAATACTGACATAGCTCTAGGAAGTCTTGACCTTTCATCCATCACTGGTGACTTGTCTGTGCCATATTACAAGGACTTCGTCGTTATCCCCAGGGCAAACACTTTGACAGTAAGTGTTACTCCTGATGGATTAGCAGATATAAAAAATGCAACCATGAATGGGCTGGAGATAATGAAGATCAGCAATGGATTTGGAAGCTTGGATGAAATAACTCATGTGAATAGTATTCCACCCAATTCATCCCCAAGAAATGGGAAAGCATATAGTATTCTTCCCAATTCATCCCCAAGAAATGGGATATCAGCAATAATAGTTGGCAGTAGTGTCAGTGCTGCAGCTTTCCTAGTTCTCATTGGAATAACTTTGTATTACATGACAGCTTACAGAAAAGGTCCACCTCTTGATAAGAGCCATGTGACAACTGGTGTAAAGGGAAGCTTTGGTTATCTTGATCCTGAGTATTTCAGAACTAAATTTCTCACTGAGAAATCAGATGTGTACTCATTTGGGGTGGTTCTGATGGAAGTTATCTGTGGCAAGCCTGCTTTAGATTATGCTCGTCCAACAGAGGAAATTAATTTGGCAAAATGGGCGTCAAGCTGCCAAGAAAAGGGCACCTTTCGTCAGATTATAGACCCAAATCTGACTGGGAAAGTGAATTTGGATTCTCTGAACAAGGTTTGTGAGTTGGCTTGGAAGTGCTTAGAGGAGCATCGTATAAATAGACCACCAGTGGGGTATGTAGTGTGTCGACTAGAGGATGCTCTCCATCTTGAGTTGGCATCACCAATTTGGCAAGTTTCTGTGGACTCTGTCATCGATGTGGGTGCAGAAGATGGAATCAAGGATCACAATGAACAAGATGCTTCTTGA 1839 0.4192 MGMPELFKWTPFVLAFLLNMGNESFASFTPVDNYLLACGSSRNIVFQGRTFAPDSDYNLLLETEKSVTVDSKSSVPFPVHQSARVFWGRSSYTFRIEKQGWHWIRLYFYPIPNLNQNLSSASIAVVADSFVLLNNFTFIKYGGSHLFKEYAINIASPTLSLTFVPSSNSFVFVNAIEVVSIPDELFSHRAIALNSSSPFDLSRLALETIYRVNMGGPLLTAQNDTLGRTWVNDRKYLPLNSSVLNVSVSPASIKYPAAVTPEIAPNWVYATGETMGNANVAQNNFGITWVFHVDPNFSYFIRVHFCDIMSKSLNSLLFNLFINTDIALGSLDLSSITGDLSVPYYKDFVVIPRANTLTVSVTPDGLADIKNATMNGLEIMKISNGFGSLDEITHVNSIPPNSSPRNGKAYSILPNSSPRNGISAIIVGSSVSAAAFLVLIGITLYYMTAYRKGPPLDKSHVTTGVKGSFGYLDPEYFRTKFLTEKSDVYSFGVVLMEVICGKPALDYARPTEEINLAKWASSCQEKGTFRQIIDPNLTGKVNLDSLNKVCELAWKCLEEHRINRPPVGYVVCRLEDALHLELASPIWQVSVDSVIDVGAEDGIKDHNEQDAS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1079 612 FunFam Receptor-like protein kinase FERONIA 205 384 - -
Glsi04g1079 612 Gene3D Transferase(Phosphotransferase) domain 1 441 584 - -
Glsi04g1079 612 SUPERFAMILY Protein kinase-like (PK-like) 458 577 IPR011009 -
Glsi04g1079 612 Gene3D - 33 181 - -
Glsi04g1079 612 Gene3D - 204 383 - -
Glsi04g1079 612 FunFam Putative receptor-like protein kinase 33 182 - -
Glsi04g1079 612 PANTHER OS03G0124300 PROTEIN-RELATED 12 445 IPR046957 GO:0004672
Glsi04g1079 612 Pfam Malectin-like domain 37 382 IPR024788 -
Glsi04g1079 612 Pfam Protein tyrosine and serine/threonine kinase 460 566 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1079 Glsi-ChrGlsi04 9546062 9548422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1079 458 583 Receptor kinase-like Gene Family AT2G21480 53.968 5.94e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi04g1079 Malectin_like 9.8e-35 CL0202