Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1076 ATGAATGGGCTGGAGATAATGAGGATCAGCAATGGATTTGGAAGCTCGAAAATTATTCCTCCCAATTCATCCCCAGGAAATGGGAAAATAGAGAGTATTCTTCCCAATTCATCCCCAAGAAATGGGAAATCAGCCAATATAGTTGGCAGTAATGTCAGTGCTGCAGCTTTCCTGGTTCTCATTGGAATAACTTTGTATTTCATAACAGCTTACAGGACAAAGTCAAGAACTAAATTTCTCACTGAGAAATCAGATGTGTACTCGTTTGGGGTGGTTCTTTTGGAAGTTATCTGTGGCAAGTCTGCTTTAGATTATGGTCGTCCAACAGAGGAAATTAGTTTGGCAAGTTGGGCGTCAAGCTTCCAAGAAAAGGGCACCTTTCATCAGATTATAGACCCAAATCTGACTGGGAAAGTGAATAAGGTTTGTGAGTTGGCTTGGAAGTGCTTAGAGGAGCATCGGGTAAATAGACCACCAATGGGGTATGTACTGTGTCAACTGGAAGATGCTCTCCACCTTGAGTTGGCATCACCGATTTGGAGAGTTTCTGTGGACTCTGTCACTGATGTGGATCTAGAAGATGAAATCAAGGATAACAATGAACAAGATGCTTCTTGA 618 0.4207 MNGLEIMRISNGFGSSKIIPPNSSPGNGKIESILPNSSPRNGKSANIVGSNVSAAAFLVLIGITLYFITAYRTKSRTKFLTEKSDVYSFGVVLLEVICGKSALDYGRPTEEISLASWASSFQEKGTFHQIIDPNLTGKVNKVCELAWKCLEEHRVNRPPMGYVLCQLEDALHLELASPIWRVSVDSVTDVDLEDEIKDNNEQDAS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1076 205 Gene3D Transferase(Phosphotransferase) domain 1 12 178 - -
Glsi04g1076 205 PANTHER OS07G0166700 PROTEIN 64 174 IPR045272 GO:0004714|GO:0006468
Glsi04g1076 205 Pfam Protein tyrosine and serine/threonine kinase 78 163 IPR001245 GO:0004672|GO:0006468
Glsi04g1076 205 SUPERFAMILY Protein kinase-like (PK-like) 79 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1076 Glsi-ChrGlsi04 9518953 9520147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1076 76 176 Receptor kinase-like Gene Family AT4G39110 50.000 9.32e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi04g1076 PK_Tyr_Ser-Thr 2e-05 CL0016