Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1070 ATGGGCATGCTGGAGTTATTCAAGTGGACTCCTTTTGTCTTAGCTTTTCTTCTAAACATGGGTAATGAATCCTCTGCCTCATTTACTCCTGTTGACAATTACTTGCTCGCTTGTGGTTCTTCCAGGAATATAGTCTTCCAGGGTAGGATTTTTGTTCCTGACTCTGACTATAAGGCCGATAAATCTTTTACAGTTTGCTCTAATTCAAGTGTCCCATTTCCAGTTCATGAGTCAGCTCGAGTCTTCTGGAGCAGATCTTCATATACATTCAGAATTGAGAAACAAGGCTGGCACTGGATCCGCCTTTACTTTTACCCTATACCAAACTTGAACCAGAACTTGTCCTCTGCCTCAATAGCAGTAGTAGCTGATAGTTTTGTCCTTCTCAACAATTTCACGTTCATGAAGTATGAAGGTTCTCACTTGTTCAAGGAGTATGCAATCAATATTACATCTCCTACCTTTTCTATCACATTCATCCCTTCTAGCAATTCAGTTGTCTTCGTTAATGCAATCGAAGTCGTCTCAATACCAGATGAGCTCTTTTCTCATCAAGCAATGGCTCTAAATTCCTCTTCCCCGTTTGACATTTCAGGATTGGCCCTTGAAATAATTTACCGGTTGAATGTGGGCGGTGATTCTCTCAACATTCAGAATGATAACCTTGGTAGGAATTGGGAGGATGATGAAAAATATCTCTCCTCCAATAGTAGTAGTGCTCTGAATATTTCAGTTAATCCTTTGACTATAAGCTATCCTTCTTCCATTACACCTGAGACAGCTCCCGCATGGGTTTATGCTACAGCCAAAGCCATGGCAGATGCACAGAGATCGCCCAATTTAAGTTGGTCCTTCCCTATAAATCCAAACTTCAGTTACGTTGTCCGGGTGCATTTCTGTGATATCGTAAGTAAGTCACTCTACACGTTCATTTTTGATCTATTTATAAATGGTAACATTGCTATTGAAAGACTCGATCTATCGTCTATAATTGGTGACTTGTCTGTGCCATATTACAAGGACTTCGTCGTCATCCCAAGAGCAAACACTTTGACAGTAAGTGTTACTCCTGTTACTCCTTATGAATTTGCAGGCACAAAAAATGTAATCATGAATGGGCTGGAGATAATGAAGATCCGCAATGGGAAATCAGATTGTATTCTTCCTAATTCATCCCCAAAAAATGGGAAATCAGATTGTGTTCTTCCCAATTCATCCACAACAAATGGGAAAGTAGATAATATTCTTCCCAATTCATCCCCAAGAAATGGGAAATCAGCAATTATAGTTGGCAGTAGTGTCAGTGCTGCAGCTTTCCTAGTTCTAATTGGAATAACTTTAACTAAATTTCTCACTGAGAAATCAGATGTGTACTCATTTGGGGTAGTTCTGATGGAAGTTATCTGTGGCAAGTCTGCTTTAGATAATGCTCGTCCAACAGAGGAAATTAATTTGGCAAGATGGGCGTCAAGCTGCCAAGAAGAGGGCACTTTTCATCAGATTATAGAGCCAAATCTGACTGGGAAAGTGAATTTGGATTCTTTGAATAAGGTTTGTGATTTGGCTTGGAAGTGCTTAGAGGAGCATCGGGTAAATAGACCACCAATGGGGTATGTACTGTGTCAACTAGAAGATGCTCTCCACCTTGAGTTGGCGTCACCAACTTGGAGAGTTTCTATGGACTCTGTCACTGCTGGGGATGCGGAAGATGGAATCAAGGATGACAATGAACAAGTTGCTTCTTGA 1746 0.4066 MGMLELFKWTPFVLAFLLNMGNESSASFTPVDNYLLACGSSRNIVFQGRIFVPDSDYKADKSFTVCSNSSVPFPVHESARVFWSRSSYTFRIEKQGWHWIRLYFYPIPNLNQNLSSASIAVVADSFVLLNNFTFMKYEGSHLFKEYAINITSPTFSITFIPSSNSVVFVNAIEVVSIPDELFSHQAMALNSSSPFDISGLALEIIYRLNVGGDSLNIQNDNLGRNWEDDEKYLSSNSSSALNISVNPLTISYPSSITPETAPAWVYATAKAMADAQRSPNLSWSFPINPNFSYVVRVHFCDIVSKSLYTFIFDLFINGNIAIERLDLSSIIGDLSVPYYKDFVVIPRANTLTVSVTPVTPYEFAGTKNVIMNGLEIMKIRNGKSDCILPNSSPKNGKSDCVLPNSSTTNGKVDNILPNSSPRNGKSAIIVGSSVSAAAFLVLIGITLTKFLTEKSDVYSFGVVLMEVICGKSALDNARPTEEINLARWASSCQEEGTFHQIIEPNLTGKVNLDSLNKVCDLAWKCLEEHRVNRPPMGYVLCQLEDALHLELASPTWRVSMDSVTAGDAEDGIKDDNEQVAS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1070 581 Gene3D - 200 380 - -
Glsi04g1070 581 Gene3D - 33 177 - -
Glsi04g1070 581 FunFam Receptor-like protein kinase FERONIA 201 381 - -
Glsi04g1070 581 Pfam Malectin-like domain 37 379 IPR024788 -
Glsi04g1070 581 PANTHER OS03G0124300 PROTEIN-RELATED 12 448 IPR046957 GO:0004672
Glsi04g1070 581 FunFam Putative receptor-like protein kinase 33 178 - -
Glsi04g1070 581 SUPERFAMILY Protein kinase-like (PK-like) 448 550 IPR011009 -
Glsi04g1070 581 Gene3D Transferase(Phosphotransferase) domain 1 422 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1070 Glsi-ChrGlsi04 9433009 9435378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1070 451 563 Receptor kinase-like Gene Family AT2G21480 45.133 1.60e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi04g1070 Malectin_like 1.3e-34 CL0202