Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1057 ATGGAAGGAACTTCGGAGACGATGAAATCTGACACTATTGGAACCGAAAACCTCAAAACCATGGCCAAGAACAAAACCCCAGTGGAAATTAGTACCACTTTGAGAGAGAGGAGCCAGTTATGGTGGGTTGAGCTTGATGAGAAGGAAGCCATTGTTGGTGCTGCTATAAAAGGCACCCAGCTGCTTCATCATCTTGCATCTTCAAACTCCACCATTGCTATAGCCTGCACACCCTCTCTTATATTTTCAGACATGGCTAGGTCTGTGCCTTTGGTTTCCTCCATCTTCGTCCTGCTTCTGCTTCTTGTGGCCACTGAGATGGGGCCAATGGTGGCAGAAGCAAGGACGTGCGAATCTCAGAGCCACCGCTTCAAGGGAACCTGTGTAAGAAGTTCCAACTGTGCTTCTGTTTGCCAAACCGAGGGCTTCCCTGGCGGCGAGTGCCGTGGCCTCCGTCGCCGATGCTTCTGCTCCAAACCTTGTTAG 486 0.5062 MEGTSETMKSDTIGTENLKTMAKNKTPVEISTTLRERSQLWWVELDEKEAIVGAAIKGTQLLHHLASSNSTIAIACTPSLIFSDMARSVPLVSSIFVLLLLLVATEMGPMVAEARTCESQSHRFKGTCVRSSNCASVCQTEGFPGGECRGLRRRCFCSKPC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1057 161 ProSitePatterns Gamma-thionins family signature. 115 138 IPR008176 GO:0006952
Glsi04g1057 161 Gene3D - 115 161 IPR036574 -
Glsi04g1057 161 PANTHER DEFENSIN-LIKE PROTEIN 1 94 158 - -
Glsi04g1057 161 SMART gth_4 116 161 IPR003614 GO:0006952
Glsi04g1057 161 SUPERFAMILY Scorpion toxin-like 115 161 IPR036574 -
Glsi04g1057 161 CDD Knot1 126 157 IPR003614 GO:0006952
Glsi04g1057 161 PRINTS Purothionin signature 116 131 IPR008176 GO:0006952
Glsi04g1057 161 PRINTS Purothionin signature 146 160 IPR008176 GO:0006952
Glsi04g1057 161 Pfam Gamma-thionin family 115 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1057 Glsi-ChrGlsi04 9263599 9272265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1057 85 161 Plant Defensins Gene Families AT2G02100 62.338 5.17e-34 113