Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1047 ATGATGTTATCAGCTTCGCCATCCTCGCTAGCGAGGAGTTCGCTAGAGGAAATGCTCGATTCGCTCAGGCGGAGAGATGAAGAAGAGAAGCCAAAGGACTTGCCACCAGCATTGCCAGCTCGTCCAACCTCGAAAGCTCGGCTTCCCTCAGCAAGAAGGTCATTGCCCAATAACTTCAAGGTTGATGGTGATCGAGGTGCGACAGAATGCCTGCCGAACGGATATAAAGTTAACGAAGACACCAAGAGAAAAGATACGGATACGGGGCACAAGAGAAACGGTAGTCTCGGGAGCAAGAAGATGAAGAGCGATCTGGAATCGCCTTACACGGTCGCATCAGAAGTGAACAAGGGCGACCAATCATCAGAGTGTCCGGAGCCTTCAGCATCTACTGCTTCTGTAGCTTCATCAGGACAGAGTCAGGAATTGGATTCAGATGACAAAATTACTTATTTCATCAAGAAGAAACTTAATGTTTGGTGTAGGCAACCAAATGGGCAGTGGAGACTAGGAAAGATACAGTCAACTTCAGGAGAGGAAGCTTTAGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGCCCGACCAGAGCTCTTACCAGCTAATCCAGATATTTTAGAGGGTGTTGATGATCTTATGCAGCTTAGTTATCTGAATGAGCCATCAGTTCTTCACAATCTTCAGTTTAGATATTCTCAAGAGATGATTTATACTAAAGCAGGGTCGATTTTAATAGCACTCAATCCCTTTAAAGATGTCCAGATTTATGGAAATGATTATGTCTCAGCTTATAGGCAGAAATGTATGAATGGCCCTCATGTTTATACTATGGTAGAGGCAGCTTATAATGAGATGATGAGAGATAAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGTTCTGGAAAGACACAGACAGCAAAAATTGCTATGCAATGTTTAGCTGCTCTTGGTGGAGTTAATAGTGGAATAGAAAATGAAGTCCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACAACTAGGAACGACAACTCTAGCAGATTTGGAAAGTTAATTGAAATTCATTTCAGTACAGCGGGGAAAATATGTGGAGCTAAAATTCAAACCTGTAAGCAATCAAGAGTTGTCCAACTTGTCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAGACTGAATCTTAGAGTGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGCACGACGATAGATGGTGTTGATGATGCCAAAAAATTTCATAAGCTAATGCAAGCACTGGATGTTGTTCGAATTTGCAAAGAGGATCAAGAGCTCATCTTTAAGATGCTTGCTGCAATCTTATGGTTGGGAAATATATCATTTCAAGTAACTGACAATCAAAATCATGTTGAGGTGGTGGACGATGAGGCGGTAAGCAGTGCTGCCATGCTGATGGGCTGCAGTTCCCAGGAGTTAATGGTAGTTTTATCTACCCGTAAAATCCATGCTGGGAAGGATACTATTGCCGAAAGGTTGACATTGAGGCAGGCAATTGACACAAGAGATGCATTGGCACAATTTATCTATGCAAGCTTGTTTGGATGGCTTGTAGAACAAGTTAACAAGTCCCTTGAACCAGGCAAACGTTGTACTGGGAGATTCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCGGAAAAATGGCTTTGAACAGTTTTGTATAAATTATGCAAATGAGAGGCTTCAACAACATTTCAATAGGCATCTGTTTAAACTTGAGCAGGAGAACTATGAAATGGATGGTGTTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGAATGCTTGGATCTATTTGAGAAGAATCCATTGGGGCTATTTTCTTTGTTGGATAAGGAATCTGATTTTCCCAAGGCCACTGATCTAACATTTGCCAACAAACTTAAACAGCACCTGAACACTAATCCCTGCTTTAAAGGGGAAAGAGGGAGGGCTTTCAGTGTTCGTCACTATGCAGGGGAGGTTTTCTATGATACAAATGGCTTTCTAGAAAAGAACGCAGATCTGCTGCCTGTTGATTCCATTCAACTCCTGGCATCATGTAGTTGTCAACTGCTGCAGTTGTTCTCCAAAATGCTTAACCAGTCTCACAAACAATTGAATTCCTTCCAGATAGGTGCAATAGACTCGCAAAAGAAGAGTGTTGGCACAAAGTTCAAGAGCCAATTGTTCAAGTTGATGCATCAGTTGGAGAACACCACACCTCACTTTATTTGCTGTATTAGACCAAATACTAAGCAGCTTCCGGGCATATATGATGAAGACCTTGTCTTACAACAGCTTAGGTGCTGTGGAGTCTTGGGTGTTGTTAGAATTTCAAGGGTTGGATATCCTATCCAACTGATGCATCAAGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAACATATCTCAGGATCCATTAAGCATCTCAGTTGCTGTCTTAAAACAATTTAATATCCCTCCCGAAATGTATCAAGTTGGCTACACCAAACTGTATCTTCGAAAAGGACAGATTGGTGCATTGGACGATAGGAAAAAACAGGTTATGGAGGGAGTACTCCAGGTTCAAAGGTGCTTCCGTGGTCATCAAGCTCGCCGATATTTCCATGAACTCAGGAATGGTGAGGCAACATTACAATCATTTGGTGGTGGAGAAAATTTGAAAAGGGAACGTGGTACAAAGTTGAACTCTTCTATGACTATTGCTTCGAAAAAACCTGAGGAGATCCAGGCTATCATACTACTACAATCTGTAATTCGTGGATGGCTGGTTAGGGGGAATGCCAGTGGCTTGCATAAGTTGAAGAAATATCCTGATAATGCAAAACCTAACCGAAAGTCACGTGTGAAGATGCTAGAAATGACGGATGGGTCCAAAGAGCAGGTTCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAGGCGGGTTCTCAAGGCTGAAGCAACTCTTGAGCGAAAGGAAGAGGAAAATACTGCATTGAAGGAACAACTAAAACAATCTGAGACTAGATGGGTTGAATATGAGATCAAAATGAAATCAATGGAGGAGATGTGGCAAAAACAAATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGGAAGAGCCTCGCTTCTGATAACACCACTAGTTATCCTGGAAGACTTGATGTTATGTCACCTCGCTGCTATGATTCTGAAGATGTTACTTCCATGGGATCTCGAACACCTGGTGGGAGCACACCCATCAAGTTTTCTAGTTCTCATTCCGTCTCTGACTCCGGTGCAGGAAGAGAAGCTAATGGTACTCTGACTGCAGTCAGCAATCTGATGAGGGAATTTGAACAGCGGAGACAGACTTTTGATGGTGATGTCAAGATTCTGCGTGAGGCTAAATCAGGGCAGTCTGCCATCATGAATCCAGATGAAGAGCTCCGGAAACTAAAACAAAGGTTTGAGGCATGGAAGAAAGAATACAAGGTTCGGTTACGGGAGACAAAAGCAAGGGCTCATAAATTGGGGAATTCAGAAGTGGAAAAAAGTCGCCGGAAATGGTGGGGGAAGTTAAGCTCCAGAGCATTATAG 3648 0.4221 MMLSASPSSLARSSLEEMLDSLRRRDEEEKPKDLPPALPARPTSKARLPSARRSLPNNFKVDGDRGATECLPNGYKVNEDTKRKDTDTGHKRNGSLGSKKMKSDLESPYTVASEVNKGDQSSECPEPSASTASVASSGQSQELDSDDKITYFIKKKLNVWCRQPNGQWRLGKIQSTSGEEALVSLSNGNVMKVARPELLPANPDILEGVDDLMQLSYLNEPSVLHNLQFRYSQEMIYTKAGSILIALNPFKDVQIYGNDYVSAYRQKCMNGPHVYTMVEAAYNEMMRDKVNQSIIISGESGSGKTQTAKIAMQCLAALGGVNSGIENEVLQTNFILEAFGNAKTTRNDNSSRFGKLIEIHFSTAGKICGAKIQTCKQSRVVQLVSGERSYHIFYQLCAGSLPGLKERLNLRVASEYKYLNQSDCTTIDGVDDAKKFHKLMQALDVVRICKEDQELIFKMLAAILWLGNISFQVTDNQNHVEVVDDEAVSSAAMLMGCSSQELMVVLSTRKIHAGKDTIAERLTLRQAIDTRDALAQFIYASLFGWLVEQVNKSLEPGKRCTGRFISILDIYGFESFRKNGFEQFCINYANERLQQHFNRHLFKLEQENYEMDGVDWTKVDFEDNQECLDLFEKNPLGLFSLLDKESDFPKATDLTFANKLKQHLNTNPCFKGERGRAFSVRHYAGEVFYDTNGFLEKNADLLPVDSIQLLASCSCQLLQLFSKMLNQSHKQLNSFQIGAIDSQKKSVGTKFKSQLFKLMHQLENTTPHFICCIRPNTKQLPGIYDEDLVLQQLRCCGVLGVVRISRVGYPIQLMHQEFSRRYGFLLSEANISQDPLSISVAVLKQFNIPPEMYQVGYTKLYLRKGQIGALDDRKKQVMEGVLQVQRCFRGHQARRYFHELRNGEATLQSFGGGENLKRERGTKLNSSMTIASKKPEEIQAIILLQSVIRGWLVRGNASGLHKLKKYPDNAKPNRKSRVKMLEMTDGSKEQVQNLPSALAELQRRVLKAEATLERKEEENTALKEQLKQSETRWVEYEIKMKSMEEMWQKQMASLQMSLAAARKSLASDNTTSYPGRLDVMSPRCYDSEDVTSMGSRTPGGSTPIKFSSSHSVSDSGAGREANGTLTAVSNLMREFEQRRQTFDGDVKILREAKSGQSAIMNPDEELRKLKQRFEAWKKEYKVRLRETKARAHKLGNSEVEKSRRKWWGKLSSRAL 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 1 15 - -
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 76 99 - -
Glsi04g1047 1215 Coils Coil 998 1032 - -
Glsi04g1047 1215 CDD MYSc_Myo8 221 863 IPR036022 -
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 17 35 - -
Glsi04g1047 1215 Pfam IQ calmodulin-binding motif 939 954 IPR000048 GO:0005515
Glsi04g1047 1215 Pfam IQ calmodulin-binding motif 882 898 IPR000048 GO:0005515
Glsi04g1047 1215 Pfam Myosin head (motor domain) 209 863 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 1089 1120 - -
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 1 141 - -
Glsi04g1047 1215 FunFam Myosin heavy chain 388 444 - -
Glsi04g1047 1215 Gene3D - 388 444 - -
Glsi04g1047 1215 Gene3D Myosin VI head, motor domain, U50 subdomain 445 553 - -
Glsi04g1047 1215 Gene3D - 879 966 - -
Glsi04g1047 1215 PRINTS Myosin heavy chain signature 617 645 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 PRINTS Myosin heavy chain signature 237 256 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 PRINTS Myosin heavy chain signature 291 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 PRINTS Myosin heavy chain signature 334 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 PRINTS Myosin heavy chain signature 564 592 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 ProSiteProfiles IQ motif profile. 937 965 IPR000048 GO:0005515
Glsi04g1047 1215 FunFam Myosin IE heavy chain 445 553 - -
Glsi04g1047 1215 Gene3D - 576 765 - -
Glsi04g1047 1215 ProSiteProfiles Myosin motor domain profile. 207 875 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 SMART MYSc_2a 201 876 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 154 203 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi04g1047 1215 Gene3D Kinesin motor domain 206 808 IPR036961 -
Glsi04g1047 1215 Gene3D - 809 876 - -
Glsi04g1047 1215 MobiDBLite consensus disorder prediction 109 141 - -
Glsi04g1047 1215 PANTHER MYOSIN 200 1206 - -
Glsi04g1047 1215 SMART iq_5 876 898 IPR000048 GO:0005515
Glsi04g1047 1215 SMART iq_5 936 958 IPR000048 GO:0005515
Glsi04g1047 1215 ProSiteProfiles IQ motif profile. 878 906 IPR000048 GO:0005515
Glsi04g1047 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 956 IPR027417 -
Glsi04g1047 1215 FunFam Unconventional myosin-XIX 576 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g1047 Glsi-ChrGlsi04 9202097 9213416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1047 1 1209 Myosins gene family AT5G54280 61.551 0.0 1509