Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g1037 ATGGAATTAAGCAATCTTCTCGACTTTAGTGTAGCAAATTGGCTTGCAGTAAGGCCACCAGCATACCCGCCCGTCAGAAAGGATGGCATTGAAAAAAAACTGCACAGAGGAGAAAGGCCAGGAAAGAAAAGTAAAGTGGTGACGCAAAAGTTAATCGGGAATCCTCTGGAAGGGCCTTGCACTGATCTTCCCGAGAATGTGAATCTAATTGACAATAATTTTACGAGCAGGTCAGGAGGTGGTAGTGGTGGTACCACAGCGAAGGATGCACTCGGAAATGATGTCCTTGCCTCTGTATGGCTAACTCAAGCTGAGAACAAGTTCATCTGTCCATGCCATGGTTCTCAGTACAACAACGAAGGCAGGATTGCCAGAGGCCCTGCTCCTCTGATGAGTTTGACTATAAGCTACTGTGGAAGCCATGGTCTTCGATCTTTCAGAATTTCAAACTGCAATCTTGACCGCGATAGCCGTCACGGCAAATATATTGCTCCTGTGAACACGCACAAGAAACCCTTCAAACCTGATAATCTTTTCCAGTCAATGTGGAAAATTGATAGTACCACTACCAGCATAAAGGCTGTAGTAGGATCCATGGCAGGTACTGGCTATAATCCCTTGGTGGCTGTGGATGGCAAACTTGGTTGCACCACTCCTCGTAAAAGCTATCATGATATTATCTATGCTATGCATCCAAGTCATGGTCATTGTATACATCTCAGGAACTACAATTATTTTCCTTCAAGTCAGGAAGTAGCTGATTCTGTTTATGCTTTGGCTGATGGAAGCCTAAATGACTGGTTTGGAGGCTTGCTATATTCAGCCGGACAACAAGCCAATGTAGCTGTTCAAGACCAACTATTGTCACTCAGTTTCACTAGTTTAGCAGTAATTTATGGGGCAGGGCTTGTAACTAGCCTTTCTCCCTGTACACTGAGTGTCTTAACACTGACCCTTGGTTACATTGGTGAGCTTACTACTGTTTTACACTCTCAGTATGAATTCCTTTTCAAATGCCTGAATTTGTGGGTTGGAATCTGGCAGGGGCGTTTGGCTCTGGCAAAAGCAGAGCTGAGTAGCTTGTATCTTCTGTTTCTTGGGACTTCTACTCTGGTCTTCATTAGGAGTAGTTCAAGTCTTGCAACCACATTAGCACTTTTGGGTGTAGCAGCATCATTTGCTGGAAAGGCTTATGGACAAATAGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAATCTGCTTGAGATAATTGAATTACAACTCCCCTCATTCTTTGACAATTTTGATCCACGTGCAGCAGCAGCCAATTTACCATCAAGTGTGCAGGCATATCTGGCTGGGCTTACTTTTGCTTTAGCTGCCTCACCTTGTAGTACACCAGTGTTGGCAACTATTCTGGGATATGTTGCTGCATCAAAGGATCCAGTGATTGGAGGCAGCTTACTTTTGACATACACAACTGGTTATGTTTCTCCTTTACTCTTAGCTGCTTCGTTTGCTGGAGCATTACAGAGTCTGCTATCATTCCGCAAGTTCTCAGCATGGATCAATCCTGTTGGGTAA 1584 0.4432 MELSNLLDFSVANWLAVRPPAYPPVRKDGIEKKLHRGERPGKKSKVVTQKLIGNPLEGPCTDLPENVNLIDNNFTSRSGGGSGGTTAKDALGNDVLASVWLTQAENKFICPCHGSQYNNEGRIARGPAPLMSLTISYCGSHGLRSFRISNCNLDRDSRHGKYIAPVNTHKKPFKPDNLFQSMWKIDSTTTSIKAVVGSMAGTGYNPLVAVDGKLGCTTPRKSYHDIIYAMHPSHGHCIHLRNYNYFPSSQEVADSVYALADGSLNDWFGGLLYSAGQQANVAVQDQLLSLSFTSLAVIYGAGLVTSLSPCTLSVLTLTLGYIGELTTVLHSQYEFLFKCLNLWVGIWQGRLALAKAELSSLYLLFLGTSTLVFIRSSSSLATTLALLGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATILGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPVG 527
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g1037 527 Pfam Cytochrome C biogenesis protein transmembrane region 379 527 IPR003834 GO:0016020|GO:0017004
Glsi04g1037 527 Pfam Rieske [2Fe-2S] domain 105 129 IPR017941 GO:0051537
Glsi04g1037 527 SUPERFAMILY ISP domain 100 131 IPR036922 GO:0051537
Glsi04g1037 527 PRINTS Rieske 2Fe-2S subunit signature 108 120 IPR005805 GO:0016020|GO:0051537
Glsi04g1037 527 PRINTS Rieske 2Fe-2S subunit signature 120 132 IPR005805 GO:0016020|GO:0051537
Glsi04g1037 527 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 289 526 - -
Glsi04g1037 527 Gene3D - 85 139 IPR036922 GO:0051537
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g1037 Glsi-ChrGlsi04 8993354 9003757 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g1037 253 526 Chloroplast and Mitochondria Gene Families AT5G54290 66.423 4.31e-108 325