Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0999 ATGGCGGCTGGGGCCCATGCTCACGTAATCTGGATGCCAGATAAGGTGCATACTGTAGCACGGTCTCCGGTAGCGTCAGACATGGGAAAGTCTCCTTCTTCTGCTGAAAAGATTGGAGTGAAGAAAGGTCCATGGACACCAGAGGAAGATCAGAAGCTCATCGATTTTATTCAGAAATATGGACATGGGAAATGGAGATCCCTTCCGAAGAATGCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAATACCCATATCAAGAAGAAGCTATTGAAGATGGGAATAGATCCTGTCACTCATACCCCATGCCTTGATCTCCTTCAGCTCTCCTCCACTCTCATGAACTCCTCTTTCTACAATAATCCAACTCAACTCAACCATCCTGGTCTGGTTGGGATGGAAAATATGGTAAACCCTAACCTCATAACTTTGCTTGCTGCTTTATTACCATCTCACAGCCAAAACCCAGATGTCACACATCAAAATTTGCAGCAAACCCTAATTGGTGAAAGTACTCTACTGCAAAACCAACTCCATAACTCTGGGCAATATTTCCAGCCATACAAGCCCCAAATCCCAGTTCAAGAAAACCAAATAAGTAACAAAGCAACATTGGAGCAAATATTTCCAATTAGTGACACTAATTTTAGCTGCCAAAATACTCTACCAAATTTGTGGCAATATAATGATGGAGCTGAATCAGCTATGCAAAGTTTGTCTTCTTCACCCAACAAGTTCAACAATATCTGGGAAAATCAAATTGTGCATAACAATTTGGTGTCATTGGTATTGTCCACACCTTCATCTTCTAGTCCGACAACTTTGAATTCACCATCTTCCACTGCTGAAGGTGTTGAAAGGGACACTTACTGCAGGAACATATTGGTGTAG 894 0.4183 MAAGAHAHVIWMPDKVHTVARSPVASDMGKSPSSAEKIGVKKGPWTPEEDQKLIDFIQKYGHGKWRSLPKNAGRTDNEIKNYWNTHIKKKLLKMGIDPVTHTPCLDLLQLSSTLMNSSFYNNPTQLNHPGLVGMENMVNPNLITLLAALLPSHSQNPDVTHQNLQQTLIGESTLLQNQLHNSGQYFQPYKPQIPVQENQISNKATLEQIFPISDTNFSCQNTLPNLWQYNDGAESAMQSLSSSPNKFNNIWENQIVHNNLVSLVLSTPSSSSPTTLNSPSSTAEGVERDTYCRNILV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0999 297 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Glsi04g0999 297 Gene3D - 40 93 - -
Glsi04g0999 297 Pfam Myb-like DNA-binding domain 42 86 IPR001005 -
Glsi04g0999 297 SUPERFAMILY Homeodomain-like 37 97 IPR009057 -
Glsi04g0999 297 SMART sant 41 89 IPR001005 -
Glsi04g0999 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 28 73 - -
Glsi04g0999 297 CDD SANT 44 87 IPR001005 -
Glsi04g0999 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Glsi04g0999 297 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0999 Glsi-ChrGlsi04 8329444 8332915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0999 28 187 MYB Transcription Factor Family AT4G21440 37.778 1.04e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi04g0999 Myb_DNA-binding 6.5e-14 CL0123