LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi04g0995	ATGGGGAAGTGGTCTTGCACTGAGTTGGGATTTGGGAAACAAACAGGAAAAGTAATAATGGCTAGATCATTGGGTGGTGGAAGACCAATGTCTGACATATGGAAACATGTTACAATATTGGATGAGAAACGAGTTAAGTGCAGATACTGTGGCCTTGCTTTTGTGAAAAGTGCTAGTAGGATCAAATCTCATGTTTCTCAAACTAAAGGCAAGGGTATTAGAGTCTGTCCCCAGTTTCCTCCACCTAACACTGATTCCAACAAAAGACTCAATAGTAATACAAGTTCTGGTAATGTTCAAGAGAATCTCTTTGATTCACAAGGTTCACCAATATTAGGTAGGCCCAAGGATCATAACAAACTCTATGAAAAAATGCTAGATTGTTACATGTCTCCCAAAATAATGTGGGAAGGGATAATGCAGCAACAGATAATAGATATTTTTGCTGAGTACTTCACTGATATTGAGCGCAAGAATAAGAGTAGCAATTTGAATTGATATGATAGTGGTATTTTCGTTATTAAGTTTATGCAGCAGTCAGCTGAGCCAAATATAAATCATTCCCCTCAACTGTTTCATAGTGATGAAGAAAGATTGGGTCTGGCTTTGAAATTGCTCAAGAGTGACCTAAACAAACAAAGAGAAAGACTATATGGAAAAAGATTGGAGGATTGCCGTGTATTGTGGTTAAACACAAAGGACATTCATATTTGCATAAAATTTCCTAAAGATATTCAGAGAGGTGAATATACAATATCAGACTATTCCAACAAAAGAGTCCAGGGTGGACTAATTGGTATCCAAGAGAACTTGGACGATTCCAATTTACAAGGTGGTTTGGAAAAAGACACTCCCATTTATAGTTTCAGTAGCTTGTACCCATGCTTGGGCGATGACGGGGACGAATTGCCAATCGTAGAGGAAGACTCTGAGGACATGCGAGTCTACCATGTACTCCTCGATGCCCAAAATGGATCGGTCCAATCCCTCCCTGTTCCCCCTCCGAAAAGCGTCTCCTTTGGTAAGCTGTTGAAGCGTGCGTTAACGGCCACAGGGAACGATTGCAGTGAAAATCTGTGA	1080	0.4019	MGKWSCTELGFGKQTGKVIMARSLGGGRPMSDIWKHVTILDEKRVKCRYCGLAFVKSASRIKSHVSQTKGKGIRVCPQFPPPNTDSNKRLNSNTSSGNVQENLFDSQGSPILGRPKDHNKLYEKMLDCYMSPKIMWEGIMQQQIIDIFAEYFTDIERKNKSSNLNXYDSGIFVIKFMQQSAEPNINHSPQLFHSDEERLGLALKLLKSDLNKQRERLYGKRLEDCRVLWLNTKDIHICIKFPKDIQRGEYTISDYSNKRVQGGLIGIQENLDDSNLQGGLEKDTPIYSFSSLYPCLGDDGDELPIVEEDSEDMRVYHVLLDAQNGSVQSLPVPPPKSVSFGKLLKRALTATGNDCSENL	359

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi04g0995	359	ProSiteProfiles	Zinc finger BED-type profile.	28	83	IPR003656	GO:0003677
	Glsi04g0995	359	MobiDBLite	consensus disorder prediction	80	107	-	-
	Glsi04g0995	359	Pfam	BED zinc finger	31	65	IPR003656	GO:0003677
	Glsi04g0995	359	MobiDBLite	consensus disorder prediction	72	110	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi04g0995	Glsi-ChrGlsi04	8264052	8267189	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi04g0995	285	325	AP2-EREBP Transcription Factor Family	AT4G17500	51.111	1.92e-06	47.0