Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0989 ATGGCCACTTCGCTTCTTCTCATGGCCTCCGACCAAGCCGACGCCCACGACAAGAACTTGAAACCCCTTTGTGGTTCCGAAGAAACCAAGACAGAATCCAGCAGAAACAGAGCCAGAAAAGCCAATGGGAAGGGTCCAAACCAGAAGAAGCAACCCCAGAGAGGCTTAGGCGTGGCTCAGCTGGAAAGCCTCAGGATTCAAGAGACCTTGAAGAAGATGACCGAAACTTCTGCACTTCCAGTACTACCACTCCTCCCTGATCAGCGTCACCTTCTTCACTGCCATCCTCCTCTATCGCCCTTCCCTGTCCATGACCCGTTTTCCGGTGTTCCCCTCCTGTATGGTGCACCGGCAAATCATGGACCACTTCAACCAGCGATTAATGGCAACATCTTTCCTGGGTTGGATCAGGGTCCGCCTATTGGGGGCGGCGGCGGCGCCGGGTGGCTGGTGACGAGTCAGGTGAATGTGGTGGATTCGTACGGAGTCGGGGCTCCGGTTTGGAGTCCATTGGTTGGAAGCCCTTTGGAGACCTCGAAAGAGCTCTCTTCAATGCCAAATGTGCATTCTGAATCTGAACGTTGTGATTTTTATCTCAAGAAAAAGCGTTTCAGCGAGGACAGTGTAAAAGGATCAAATACAAGGAGAGACAAGCCTTCAGACATATGGCCCATCAATGGCCCTGATTTTCTGGGATTCAGTCCCCAACAAGTCCCAAACCTCACTGGAGAAACCACTGATCATTTCACCCCCAGAACGACCAGACATGCTGCTACATCTTATGCCGCTCGTAATCTGGATAAGTTTGTGGAGGTTGTGGCGGTTCACAGGAAGGGAAACTCAATGACAGGGAGAGTTTTCATGGAATATGAATTTTTCCCAGGAAAAGATGGCAGAGGAAGCACTTCCACGGAGGTGGAATTGCCTACAGTAGGTTCAGCTGCAGTTAGAAAGCTTTTCCGTTCCAGAGTTAGTTTTCATCTTTTTTGTGCTGAAACACATGGGTGGCATCTCTGTCTTTTCCCTTATGGGATTCAAGTAATGCCTTTGGAGAATGATCCAAAAAACGTGAAAAAGATTCATCAGAAAGGATGCAAAAATCTGAACACTTGCACTGCCGTTGCCCCTCTGGCACCAAAAGCAGGACAGTGGTGGCTGTTGGTGGTGAGTAATAAAGAACCAGGCTATGCTACTACAACCCCGGCTGATGATCAGTACAAAGACTGTAATGAGTATAAATATATGGCAGTGTCAGTAGAAGTAGGAGATGCGCTGGCTTCTCTCTCTCTCTCTCTACCCCACTTTTTGATTGGGTGTCGGTTATCAGCTTATCTTATTTATGCCCAGCTTTTCCTTTTCCCTTCTTCTAGCTTGCTGTAA 1380 0.487 MATSLLLMASDQADAHDKNLKPLCGSEETKTESSRNRARKANGKGPNQKKQPQRGLGVAQLESLRIQETLKKMTETSALPVLPLLPDQRHLLHCHPPLSPFPVHDPFSGVPLLYGAPANHGPLQPAINGNIFPGLDQGPPIGGGGGAGWLVTSQVNVVDSYGVGAPVWSPLVGSPLETSKELSSMPNVHSESERCDFYLKKKRFSEDSVKGSNTRRDKPSDIWPINGPDFLGFSPQQVPNLTGETTDHFTPRTTRHAATSYAARNLDKFVEVVAVHRKGNSMTGRVFMEYEFFPGKDGRGSTSTEVELPTVGSAAVRKLFRSRVSFHLFCAETHGWHLCLFPYGIQVMPLENDPKNVKKIHQKGCKNLNTCTAVAPLAPKAGQWWLLVVSNKEPGYATTTPADDQYKDCNEYKYMAVSVEVGDALASLSLSLPHFLIGCRLSAYLIYAQLFLFPSSSLL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0989 459 PANTHER OS01G0212500 PROTEIN 28 306 IPR040356 GO:0003700
Glsi04g0989 459 MobiDBLite consensus disorder prediction 1 58 - -
Glsi04g0989 459 MobiDBLite consensus disorder prediction 14 39 - -
Glsi04g0989 459 Pfam Plant transcription factor NOZZLE 4 300 IPR014855 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0989 Glsi-ChrGlsi04 8219273 8221820 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Glsi04g0989 NOZZLE 1.4e-07 No_clan