Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0987 ATGCTACACGTGGCAAGAAGTGATCCGCTGTGGAAATTCTTACTACGTCAAAATGGTACGGTGCAGCAGAAGGGAGACGAAGAGAGAATGGAAGAGTGCGCGTTGTGTGGGAAGCGGGCAAGGATGTACTGTGAGTCGGACCAGGCGAAGCTATGCTGGGACTGCGACGACAAAGTTCACGGAGCTAACTTTCTGGTGGCGAAGCACACAAGGGTTCTTCTGTGCCGTTTGTGTCAATCTTCGACTCCATGGAAGGCTTGCGGTCCCAAGCTCACCCCCACTGACTCCCTCTGTCATCCCTGTGCTACCACCGGTGGCCACAGGGAGGAAGAAGAAGATGATCGTGATCGTGATTGTGAGGATGAAGATGGGGACTACGGTTCTGACGCTGATTCTGATTCTGATCTTGGTGATGATGATGTCAACGAGGAGGACCAGGACGAGGAGGAGGGAGAAAACCAGGTGGTGCCATGGTCGTCTGCTTCTGCTTCGTCGCCACCTCTGCCTCTTACGAGTTCCGCTTCTGCTGGTGCTGGTTTATCGTGGAAGCGGGTACGAGGGAACTCGTTTGTCGATTCTGATGATGAGATAGATTGTGCCTCATCTGAATTGCCCTCTGCTTCACAATTACCCGAAGATGATTCATCCTCTTGGAGCATCATCAGGCCATGGAAGCAGCCTAGAACTACTCAACGCAGCCAATCATCCCTAGTTGAAGATGATGCACGATGA 732 0.5232 MLHVARSDPLWKFLLRQNGTVQQKGDEERMEECALCGKRARMYCESDQAKLCWDCDDKVHGANFLVAKHTRVLLCRLCQSSTPWKACGPKLTPTDSLCHPCATTGGHREEEEDDRDRDCEDEDGDYGSDADSDSDLGDDDVNEEDQDEEEGENQVVPWSSASASSPPLPLTSSASAGAGLSWKRVRGNSFVDSDDEIDCASSELPSASQLPEDDSSSWSIIRPWKQPRTTQRSQSSLVEDDAR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0987 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 32 227 - -
Glsi04g0987 243 SMART bboxneu5 28 74 IPR000315 GO:0008270
Glsi04g0987 243 MobiDBLite consensus disorder prediction 202 237 - -
Glsi04g0987 243 ProSiteProfiles Zinc finger B-box type profile. 28 74 IPR000315 GO:0008270
Glsi04g0987 243 MobiDBLite consensus disorder prediction 114 152 - -
Glsi04g0987 243 MobiDBLite consensus disorder prediction 153 178 - -
Glsi04g0987 243 Pfam B-box zinc finger 30 73 IPR000315 GO:0008270
Glsi04g0987 243 MobiDBLite consensus disorder prediction 103 243 - -
Glsi04g0987 243 CDD Bbox1_BBX-like 33 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0987 Glsi-ChrGlsi04 8194240 8195309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0987 31 203 C2C2-CO-like Transcription Factor Family AT4G27310 43.842 1.29e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi04g0987 zf-B_box 8.7e-08 No_clan