Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi04g0974 | ATGAACCAAACCAATTCTATGGCCGTTCGCTATGTATGGGTGGAAGATGATCGAAATTGGATCGTCTATAAGTCAGTGCCAAAAGATTACTGTGATAACTATAACCTCTGTGGACCCAATGGGAATTGCATTATCAATGATTCACCGGGAGAACATGGGAGCAAGAAGAAGTTGACAATAATAGTTGTCTCAACCTTAGCTGCAATTTCAGGGATGCTTTTACTTGGTTTCTCTTATTATATCTACCAAGTTCAGAGGAAGAAAACTGAGAAATCAGAAACCATAGAAGAAGATCCAAACAGTGGAGGAAGTGTGGATGATCTGGAGCTTCCATTGCTTGACCTTTCCACAGTAGCTATCGCTACCAATAACTTTTCAATGCAGAACAAGATTGGGGAAGGTGGTTTTGGACCAGTATATAGGGGAAGATTAGTACATGGGCAAGAAATTGCTGTCAAGAGGCTTTCAGGCAGCTCAGGACAAGGAATGACTGAGTTTAAGAATGAAGTAAAGTTGATAGCGAAACTTCAGCATCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAGGGTGGGAACAAAATGCTGGTGTATGAATACATGCCTAACAAAAGCTTGGACTGCCTCATTTTCGATGATACCAAAGGAAAACTACTAGATTGGTCTAAGCGCTTTCACATTATTTGTGGAATTTCTCGCGGACTTCTCTATCTTCATCAAGATTCCAGATTAAGAATTATTCATAGAGATCTCAAGGCAAGCAATGTTTTACTCGATGATAAGTTGAACCCAAAAATATCAGATTTTGGCATAGCTAGAATCTTTGGAGGAGACCAAACTGAAGGAAACACGAAGAGAGTTGTTGGGACTTATGGGTACATGGCTCCAGAATATGCTGCCGACGGACTTTTTTCTGTGAAATCTGATGTTTTTAGTTTTGGCATATTGCTACTAGAGATTATAAGTGGAAAGAGAAGTAGAGGGTTTTTTCTGGCAGATCACTCCCTCAACCTTATTAGTCATGCTTGGACACTGTGGAAAGAAGGCAGGGCTTTAGAACTAATTGACTCAAACATAGTGGACTCTTGCATTCTATCAGAAGTGTTGCGTTGCATCCATGTTGGTCTTTTGTGTGTCCAACAATACCCAGAGGATAGGCCTACCATGCCGTCTGTGGTTTTGATGTTGGGGAGTAAAAGTGAATTGGTCGTGCCTAAAGAGCCTGGTTTCTTTACCAAGAAAGATTCCATTGAAACCAATTCCATGTCAAGTCAAATGGAAATTAGCTCAACCAACGAATTAACCATTACCTTATTAGATGCACGATGA | 1329 | 0.4041 | MNQTNSMAVRYVWVEDDRNWIVYKSVPKDYCDNYNLCGPNGNCIINDSPGEHGSKKKLTIIVVSTLAAISGMLLLGFSYYIYQVQRKKTEKSETIEEDPNSGGSVDDLELPLLDLSTVAIATNNFSMQNKIGEGGFGPVYRGRLVHGQEIAVKRLSGSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCIQGGNKMLVYEYMPNKSLDCLIFDDTKGKLLDWSKRFHIICGISRGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGIARIFGGDQTEGNTKRVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRSRGFFLADHSLNLISHAWTLWKEGRALELIDSNIVDSCILSEVLRCIHVGLLCVQQYPEDRPTMPSVVLMLGSKSELVVPKEPGFFTKKDSIETNSMSSQMEISSTNELTITLLDAR | 442 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0974 | 442 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 201 | 404 | - | - | |
| Glsi04g0974 | 442 | CDD | STKc_IRAK | 131 | 396 | - | - | |
| Glsi04g0974 | 442 | Gene3D | Phosphorylase Kinase; domain 1 | 84 | 200 | - | - | |
| Glsi04g0974 | 442 | SUPERFAMILY | Protein kinase-like (PK-like) | 110 | 396 | IPR011009 | - | |
| Glsi04g0974 | 442 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 36 | 441 | - | - | |
| Glsi04g0974 | 442 | Gene3D | Transferase(Phosphotransferase) domain 1 | 201 | 406 | - | - | |
| Glsi04g0974 | 442 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 86 | 200 | - | - | |
| Glsi04g0974 | 442 | SMART | serkin_6 | 125 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi04g0974 | 442 | Pfam | S-locus glycoprotein domain | 7 | 49 | IPR000858 | GO:0048544 | |
| Glsi04g0974 | 442 | ProSiteProfiles | Protein kinase domain profile. | 125 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi04g0974 | 442 | Pfam | Protein tyrosine and serine/threonine kinase | 126 | 393 | IPR001245 | GO:0004672|GO:0006468 | |
| Glsi04g0974 | 442 | Pfam | Domain of unknown function (DUF3403) | 400 | 442 | IPR021820 | GO:0004674 | |
| Glsi04g0974 | 442 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 246 | 258 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi04g0974 | Glsi-ChrGlsi04 | 8013083 | 8015916 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0974 | 49 | 410 | Receptor kinase-like Gene Family | AT4G23230 | 54.545 | 3.89e-137 | 405 |
Transcription factors information