Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0963 ATGGACCGTAGATTCAACCCCCGCCACCACCCACAACAAGAATCCGAGCCTGAACCCATTTCAGAAACCGGTCCGGACTCTTCATCCTCCGGTGACGACACCAAAGCTGAAGAACCATCTCCTAAGAAAAGGAGGGGGATGCAGAAGAGGGTGGTGGTCATACCGATCGGTGACGTGGAGGGATCTAAGAGCAAAGCAGAGACGTATCCACCGTCCGATTCCTGGGCCTGGAGAAAGTACGGCCAGAAGCCCATCAAAGGCTCCCCTTATCCCAGGGGATATTACCGATGTAGTAGTTCGAAGGGTTGCCCCGCGAGGAAACAAGTTGAGAGAAGCCGTCTGGACCCCACAATGCTCACCGTCACCTACGCTAACGACCACAACCACTCCGTCCCGGTCGGCAAGTCTCACTCCGTTAGCTCCTCAGCCGCCACCGCTAACGCTGCCGTTCCTTCCAGCGATTCGCCTGCTAGAGTCGCGCCGGAAGAGATAACGGTGTTCGTAAGCCATCCCGATCTCGAACTCGACGGCGACTCGGCGGTTCTGCTCAGCAATCACCACGCTCAATTCGGATGGTTCGATGACTTGGCTTCCACCGGAGCGCTGGAAAGCCCGATCTGCGGGGAGGTGGAGGATATGACGTTGACGATGAGGGAGGAAGACGAATCTCTGTTCGCCGATCTCGGCGAGTTGCCGGAGTGTTCGGTGGTTTTCCGGCGTAGGAATATTCCGAACCCTAGTGCGATTCAGTGCGGTGGAGTCACAAGATAA 771 0.5668 MDRRFNPRHHPQQESEPEPISETGPDSSSSGDDTKAEEPSPKKRRGMQKRVVVIPIGDVEGSKSKAETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRLDPTMLTVTYANDHNHSVPVGKSHSVSSSAATANAAVPSSDSPARVAPEEITVFVSHPDLELDGDSAVLLSNHHAQFGWFDDLASTGALESPICGEVEDMTLTMREEDESLFADLGELPECSVVFRRRNIPNPSAIQCGGVTR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0963 256 MobiDBLite consensus disorder prediction 1 74 - -
Glsi04g0963 256 Gene3D WRKY domain 58 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi04g0963 256 SMART WRKY_cls 71 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi04g0963 256 Pfam WRKY DNA -binding domain 73 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi04g0963 256 MobiDBLite consensus disorder prediction 31 45 - -
Glsi04g0963 256 ProSiteProfiles WRKY domain profile. 66 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi04g0963 256 MobiDBLite consensus disorder prediction 1 16 - -
Glsi04g0963 256 MobiDBLite consensus disorder prediction 127 157 - -
Glsi04g0963 256 MobiDBLite consensus disorder prediction 127 152 - -
Glsi04g0963 256 FunFam WRKY transcription factor 65 58 132 - -
Glsi04g0963 256 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 236 IPR044810 GO:0003700
Glsi04g0963 256 SUPERFAMILY WRKY DNA-binding domain 67 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0963 Glsi-ChrGlsi04 7842521 7844695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0963 14 243 WRKY Transcription Factor Family AT3G58710 50.413 2.31e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi04g0963 WRKY 1.6e-25 CL0274