Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0955 ATGGAAGGGACTGGATGGAATAGAGATGGCGCTGGCGGAGACGATGAAGGGGATAACTGTTTTCGCCCCAGATTAATTGAGATTACTGGATTTGGGGCACTATTGAACTTTGTAGAACGAAGAAGTGCTGATATGGGTGGCAGAATGCAGGAAAATAGAGGCCACTTAGGTATAGATCATTCAGATGTGAATTACCAGCCTGATCGGTCCCTGCAAGTCTCTCCTCAAACTCCTATCATTGAAGCTGGAACGAACAGTGAGAGAGCAAGTGACCTTCTTCTTGCAGTGTCAATAAGTGCTGAGCCAACCAGGGCAAAAATCTTTGAGCTTGCTTGTTCAGCTATGGAGGAGTTGACAAAGATAGCCATTGCTGGGAAACCCTTATGGCAATCACAGAAAGTAGAAAAATATGAGACTCTGAATGATATTGAATACCTAAGAGAATTTGGACATGTTGATGCAACACTCCAGGAGATTATCAAGATGGTTGAGGTTGGAGAGCCTCTCTTTTTACCCAGCTTTGACTCATACCAAGTTGAATATGAACTTGCATCCAAGTCAAGTACTCCCTCAGAAGTTCTGCAAATTGAAGCTTCACGAGATATTGCTTATGTTAAGATGAACCCAATCGACCTTGTGGAATTGCTTATGGATTTGAAGCAATGGTCGGGAGTGTTTTACAATATAGTCACAAGAGCAATGATTCTAGGAATCTTGTCAAATGGAGTTGAAGGAAGCTTTGATGGACAATTGCAAGTGATGAGCGCAGAGTTTCATTTGCCCTCCCCGCTTATTTCAACTCGAGAGTGTTATTTTGCAAGGTACTGTAAGCAGTTGTCTGACAAGATATGGGGGGTCGTAGACATATCCTTGGAGAAGTTTTTCCCTCATCCATCCAACAATTTGCGAAGAAGACCATCAGGCTGCTTGATAGAAGAAATGCCCGAAGGATACTCTAAGGTCGCTTTTAGACTTATTAATGAGAAAATAATGATGGTGATAGCTGAATCTGGGAGAACAAGTGTATTGAAGCTCGCAGAGAGGATGACGAAAAGCTTTTGTGTTGATGTAAGTGGATGCAGAGGGAACCTGTGGGTAGAATTGCCTAAATCTTCTTCTAGTTGTGAAGACGTGAGGGTGACGATTAATAATAATAATAGCATAGACGAACCTGGAAGACCTAGTGATACAACAGTGGTTTTCTCTACTTCTCTCTGGCTTCCAACCTCCCCAAGGAAATTATTCAACTTCCTTCGTGATGAGCATTTCAGAGACAAGTGGGATTTGCTTTCACGAGGACTTTCTATACGAGAACTCGCATATGTTGTTAAGGGCAAAGATGCGGTAAATCGTGTTTCCATAATGCAAGTTAATGATGCCCTAGACAAGAATGTGATCCATTACCTGCAAGAGAGTTACACAGACATTGCTGGTTCCTATGTAACTTATGCTCCAATAGACATGTTTGCTCTATCAGCCCTTCTAAATGGAGGGAACCCAGACGTGGTATCTATATTGCCTTCTGGGTTTGCTATCCTTCCAGATAGGATGCCAAAAGATGATGGGGAAGATAGCGGCACTGGAACCGTTTTAACTATTGCATTCCATATAATTGACAATTCTTCCAATAAGGCATACATCCCTTCTGAATCAGTGAATACCATTCACAAAATTATTAAAGAAACTGTCATGGCTATAAAGGATGCTGTGCTGTATGATAATCTGATCTAA 1731 0.4183 MEGTGWNRDGAGGDDEGDNCFRPRLIEITGFGALLNFVERRSADMGGRMQENRGHLGIDHSDVNYQPDRSLQVSPQTPIIEAGTNSERASDLLLAVSISAEPTRAKIFELACSAMEELTKIAIAGKPLWQSQKVEKYETLNDIEYLREFGHVDATLQEIIKMVEVGEPLFLPSFDSYQVEYELASKSSTPSEVLQIEASRDIAYVKMNPIDLVELLMDLKQWSGVFYNIVTRAMILGILSNGVEGSFDGQLQVMSAEFHLPSPLISTRECYFARYCKQLSDKIWGVVDISLEKFFPHPSNNLRRRPSGCLIEEMPEGYSKVAFRLINEKIMMVIAESGRTSVLKLAERMTKSFCVDVSGCRGNLWVELPKSSSSCEDVRVTINNNNSIDEPGRPSDTTVVFSTSLWLPTSPRKLFNFLRDEHFRDKWDLLSRGLSIRELAYVVKGKDAVNRVSIMQVNDALDKNVIHYLQESYTDIAGSYVTYAPIDMFALSALLNGGNPDVVSILPSGFAILPDRMPKDDGEDSGTGTVLTIAFHIIDNSSNKAYIPSESVNTIHKIIKETVMAIKDAVLYDNLI 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0955 576 SUPERFAMILY Bet v1-like 198 323 - -
Glsi04g0955 576 SUPERFAMILY Bet v1-like 338 562 - -
Glsi04g0955 576 ProSiteProfiles START domain profile. 100 323 IPR002913 GO:0008289
Glsi04g0955 576 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 330 570 IPR042160 -
Glsi04g0955 576 SMART START_1 151 355 IPR002913 GO:0008289
Glsi04g0955 576 Pfam START domain 155 321 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0955 Glsi-ChrGlsi04 7648012 7654286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0955 91 573 Homeobox Transcription Factor Family AT4G04890 40.183 5.16e-114 354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1445 14 15007411 15011586 Glsi04g0955 04 7648012 7654286 CCT
Glsi04g0955 04 7648012 7654286 Glsi04g0955 04 7648012 7654286 ECH