Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0929 ATGTCAGAAACCTCTCGTGCTCTTTCCTCACTAGCCATCTCTCTTAACAAGGTGAATAGTTTAAATATGATGGTCAAATTCAGGCTAACTTTAGCTTCATTCACCACATTGAAGAAATTGAAGCAAGAATTAGCCAAATGGCTTGCTTAGTTAGAAAAAGTTTGGATTTGGAGGAGGTTATGTTCTGTGTCGGATTCTGGCACGGCAAAGCAAAAGAAGAGGAAGGATAATGTGTGTGCGTGCGCTTCAAAATGGTCACCACGAACCAGGACCGGCCTCCAATATCATCATCACTCACATCCCCAGCTGCAAGCTCTTCAAAGGTTTCAGAAGTTTCTTGGTGATGAGTTCCTCGTAGGTGAAGAGGAACAAGTTGGAGGGGAAAAAATGGTGGGAACTCCGATCAATGGAAGAACAAGGCAAGCTTTTAGAGTTGTTAATGGCGGGCATGATCTCGGCCCGAGCAGTGCTCCGCCAAGCAATGCTGGGTCGGAATGTGGTTTTATAGAGTTCACCAGAGAGGATGTTGAAGCATTGCTGAATGAGAAAGCCAAAAGGAAGGATAGATTTAATTATAAGGAAAGATGCGAAAATATGGCAGAATATATAAGGAGGCTTAAGATTTGCATTAGATGGTTCCAAGACCTTGAGTTAAGCTACTCGTTAGAGCAAGAAAAATTAAAGAATTCATTGGAATTATCCCAGCAAAAATGCGTAGAAATAGAGTTACTGCTTAAAATCAAGGAAGAAGAACTGAATTCAATTATTGCGGAAATGAGAAGGAATTGCACGTCTTTACAAGAGAAATTAATAAAGGAGGAATCGGATAAGTCGGCGGCAGTGGAATCTCTTGCGAAAGAGAGAGAGGCTAAGCTTAACATTGAGAGGTCGCAGACTACTCTGTCCGAGGATCTTGGGAGAGCTCAACGAGAGCTCCAAAGTGCAAATCAAAAGATTTCGTCACTAAATGAAATGTATAAGCGGTTACAGGATTACATAACAAGCTTACAACAATATAATGGAAAGCTTCATACAGAGCTTTCTTCTGTTGAAGATGAACTTAAGCGTGTAGAAAAAGAGAAGGCCAGTGCAGTTGAGAACCTCACCGTGTTAAGGGGTCAACTTACTCTGTCCAAATCTTCTCAAGAAGAGGCCATAAAACAGAAGGATGCTCTGGCTAGTGAAGTTACATCTCTTAGAGGAGAATTGCAACAAGTTAGAGATGATCGAGACCGCCAATTATCTCAAGTGCAAACTTTAACTTCTGAATTAGCGAAATTTAAAGAATCTACGGAGAAGTCCTGCATTGAGCTGGACACTTTGAGGAAAAAAACGAATGAACTGGAGGCAAGATGTTCTATGCAAGATAGTCAGCTAAAGGCATTGCAAGAGCAGCTAACCGTTGCAGAGAAGAAACTAAAGGTGTCTGATATATCTGCCCTTGAGACAAAGACAGAATTTGAAGGGCAACAAAAACTTGTAAATGAGTTGCAAAGACGCTTGGCTGATGCAGAACATAAACTAATAGAAGGAGAGAGGCTGCGGAAAAAATTACATAACACCATTCTGGAGTTAAAAGGGAACATCCGCGTATTCTGTAGAGTGCGACCTTCATTGCCTGATGAAGGTTGTAACCCAGAAGGCAAGATAATCTCTTACCCCACATCGATGGAAGCTTCTGGACGAGGCATTGACTTAAACCAAAGTGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTGCGCCAGACGCATTGCAAGAAGAAGTTTTTGTAGAAATTTCACAACTTGTACAAAGTGCTCTTGATGGCTATAAGGTTTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACGATGATGGGCAGACCTGGACATCCAGGGGAAAAGGGTTTAATACCTCGTTCATTAGAACAAATATTTCAAACAAAGCAGTCTCTGCAATCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATTTATAATGAAACGATTCGTGATCTGTTATCTACAAATAAATCATCATCAGATGCAATGCGTACAGAAAATGGTACTCCTGGAAAACAGTATGCAATCAAACATGATGCCAGTGGAAATACACTCATTTCTGATCTTACAGTAGTGGATGTTCAAAGTGCTAAAGAGGTTGCATTTCTTCTAAATCAAGCTGCAAATAGCAGATCTGTTGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATACGGGGTTAATGAGAGCACTGACCAACAGGTACAAGGTATTCTGAATCTTATTGATCTTGCTGGGAGCGAGCGTCTTTCAAAGAGTGGGTCAACTGGGGACCGGTTGAAAGAAACTCAAGCAATCAATAAAAGTTTGTCATCATTAAGTGATGTTATATTTGCATTGGCAAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTTCTTCAGCCTTGCCTCGGTGGAGACTCGAAGATCTTAATGTTTGTCAACATCTCTCCTGATTCTTCTTCAGTGGGAGAGTCACTATGTTCACTCCGTTTTGCATCCCGAGTGAATGCTTGCGAGATTGGAACAGCCCGGCGACAAACCAATGGCCGTACTATGGACTCACGCTTGAGCTATTTCTAA 2670 0.4124 MSETSRALSSLAISLNKVNSLNMMVKFRLTLASFTTLKKLKQELAKWLAXLEKVWIWRRLCSVSDSGTAKQKKRKDNVCACASKWSPRTRTGLQYHHHSHPQLQALQRFQKFLGDEFLVGEEEQVGGEKMVGTPINGRTRQAFRVVNGGHDLGPSSAPPSNAGSECGFIEFTREDVEALLNEKAKRKDRFNYKERCENMAEYIRRLKICIRWFQDLELSYSLEQEKLKNSLELSQQKCVEIELLLKIKEEELNSIIAEMRRNCTSLQEKLIKEESDKSAAVESLAKEREAKLNIERSQTTLSEDLGRAQRELQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSSVEDELKRVEKEKASAVENLTVLRGQLTLSKSSQEEAIKQKDALASEVTSLRGELQQVRDDRDRQLSQVQTLTSELAKFKESTEKSCIELDTLRKKTNELEARCSMQDSQLKALQEQLTVAEKKLKVSDISALETKTEFEGQQKLVNELQRRLADAEHKLIEGERLRKKLHNTILELKGNIRVFCRVRPSLPDEGCNPEGKIISYPTSMEASGRGIDLNQSGQKHSFTFDKVFAPDALQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTKQSLQSQGWKYEMQVSMLEIYNETIRDLLSTNKSSSDAMRTENGTPGKQYAIKHDASGNTLISDLTVVDVQSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKILMFVNISPDSSSVGESLCSLRFASRVNACEIGTARRQTNGRTMDSRLSYF 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0929 889 SMART kinesin_4 526 876 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 Coils Coil 249 276 - -
Glsi04g0929 889 Coils Coil 298 332 - -
Glsi04g0929 889 SUPERFAMILY Tropomyosin 379 513 - -
Glsi04g0929 889 FunFam Kinesin-like protein 474 870 - -
Glsi04g0929 889 Coils Coil 389 423 - -
Glsi04g0929 889 Coils Coil 445 472 - -
Glsi04g0929 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 866 IPR027417 -
Glsi04g0929 889 ProSiteProfiles Kinesin motor domain profile. 528 868 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 PANTHER KINESIN-LIKE PROTEIN KLP-3 379 876 IPR027640 GO:0003777|GO:0007018
Glsi04g0929 889 Pfam Kinesin motor domain 534 866 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 CDD KISc_C_terminal 526 870 - -
Glsi04g0929 889 Gene3D Kinesin motor domain 473 870 IPR036961 -
Glsi04g0929 889 Coils Coil 340 374 - -
Glsi04g0929 889 PRINTS Kinesin heavy chain signature 769 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 PRINTS Kinesin heavy chain signature 818 839 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 PRINTS Kinesin heavy chain signature 738 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 PRINTS Kinesin heavy chain signature 604 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi04g0929 889 Coils Coil 169 189 - -
Glsi04g0929 889 Coils Coil 886 889 - -
Glsi04g0929 889 Coils Coil 487 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0929 Glsi-ChrGlsi04 7402473 7417628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0929 352 865 Calmodulin-binding Proteins AT5G65930 34.312 6.15e-76 268