Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0925 ATGCCAACAGTGTGGTTCTCTCTGAAGAGGTCTCTACACTGCAAATCAGAGCCATCAGATGTTCATGACCCAAAATCAAGGAAGCATTTGAGCACAATCTTGACCAAAAGAGCAGGAAGGTCTGGGTGTTCGAGGAGCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCATCTAGAGAAGCCTCCAAGTTGCAGCCCAAGATCCATAGGAAGCAGTGAGTTCCTCAACCCAATAACCCATGAAGTGATTCTAAGTAACTCAAGGTGTGAGCTGAAAATCACTGGCTTTGGAGGATTCCAAGAAGGGGTTGGCAATGGTGGTCCTACTGGTGGTAGTGGAGGTGGAAATAATAGTGGTGGTTCCACCTTTGTCGGTACCTTAAGGCCTGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTCAACCCCTCTTTTAGGACTTCATCAACTCCACCAAGGAAATCCCCTTTCCTTTTATCAGATAAAGAAGGGTCTGCTTTGCATGGTGGGGGTGGACTTCCTTCAAGCAATAGGGTATCTCTTGAGGCAGATTCAAATGGGTCTTCTTCCGCGGTGACTTGCCACAAATGTGGAGAGCAATTTAGCAAATGGGAAGCTGCAGAAGCTCATCATCTCTCCAAACATGCTGTTACTGAGCTTGTGGAGGGCGATTCTTCAAGGAAAATAGTGGAGATAATATGCAGAACTAGCTGGTTAAAGTCTGAAAACCAGTGTGGCAGAATTGAGAGGGTTCTGAAAGTCCATAACATGCAAAAGACTCTGGCCCGTTTTGAAGAGTACCGAGAGATGGTGAAGATCAAAGCCAGCAAGCTACCCAAGAAGCACCCTCGGTGCCTGGCTGATGGAAACGAGCTTCTGAGGTTCTATGGCACAACAGTTGCCTGCTCACTGGGTCTCAATGGCTCTTCTAGCCTCTGCCTGTCTGAAAAATGCTGTGTTTGTAGAATCATTAGAAATGGGTTTTCTGCAAAGAAGGAGCTCAAGGGTGGAATAGGAGTTTTCACAACCTCCACAAGTGGAAGAGCCTTTGAATGTATTGAGATTTTTGAAGATGACCCTTCAACAAGGAAGGTGCTGATAGTGTGTAGAGTGATTGCAGGCAGAGTTCATAGGCCTCTGGAGAACATTCAAGAGATGGCAGGCCAGACTGGGTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTTAATCCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCCTGA 1296 0.4622 MPTVWFSLKRSLHCKSEPSDVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGVGNGGPTGGSGGGNNSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSALHGGGGLPSSNRVSLEADSNGSSSAVTCHKCGEQFSKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFECIEIFEDDPSTRKVLIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0925 431 MobiDBLite consensus disorder prediction 146 160 - -
Glsi04g0925 431 Gene3D - 212 430 - -
Glsi04g0925 431 SUPERFAMILY ADP-ribosylation 222 430 - -
Glsi04g0925 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 429 - -
Glsi04g0925 431 MobiDBLite consensus disorder prediction 113 128 - -
Glsi04g0925 431 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Glsi04g0925 431 MobiDBLite consensus disorder prediction 106 189 - -
Glsi04g0925 431 FunFam C2H2-like zinc finger protein 221 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0925 Glsi-ChrGlsi04 7375286 7377282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0925 1 431 C2H2 Transcription Factor Family AT5G54630 69.181 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi04g0925 None None None