Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0920 ATGGACTCACAGCAGCTTTTCAGTTACAGTGTGATTGGTACTGGACTAGCTTCCACATCATCTCATCCTACTTTTTCATCACTACCCAGCAGGCTGCTTGGATCCTTGAAAGTTGACATAGGGAACTCACCTAGTTCGCCCTTTTCTACTCATTTTGATTCTGATTCTCTTTCTACATTGAGTGACAGCCAGGATAAGCACAGTTCTGGGGAGATCCTTTCTGGTGTGAGCCCTTCTTGTAACTCTTTGCTGGAAACTAATAATTATTTGCACAGGCCAGCCTCATCCGTGGACTGTCTCCAAGACGGTCTGCATCTATATTCTGCTAGGAGCTCTCTTCTAGAGGATGCAAGTTGTAGCCAGAACGTCAGGCACACACTGCTAGAATTAGAGACGGCTCTGATGGCTCCTGACAATGGTAATGAAACTACCACATCAAATAGTTCTTTGGGTGAGACTGAGAGAAGAGGGTCAATGACTTCTGGCAATAGAAATAGATCCTGGAGCCATGACCACCAGGGCTTGCAATATATTCAGAGTCAGCCATCTTTTGTTAATAGCAGTAGGCAGTCAAGTGAAGTTGCACATGTAGAGAAACGTCGCAGATCAATGGAGGAAGCATTGCTACAGGGCTTCCCATCAAGCAATTTGAGACAATTGCTGATTGCCTGTGCAAAGGCTCTCTCGGAAAACAACACAAAAGATTTCGATCAGTTGATTTCAAAGGCTAGAAATTCTGTGTCTATTATTGGGGAGCCAATCCAACGAATTGGTGCTTATTTTGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAACAACATCTATCGTGCTCTTAGGTGCAGAGAGCCTGAAGGCAAAGACCTGCTCTCATACATGCATATGCTGTACGAAATCTGCCCATACTTGAAATTTGGTTACATGGCTGCTAATGGAGCCATTGCAGAAGCATGCAGAAATGAGGATCGTATCCACATCATAGACTTTCAGATTGCTCAGGGAAGCCAATGGGTGACTCTCCTTCAAGCCCTTGCAGCAAGACCTGGTGGGGCTCCCCATGTGCGGATCACGGGGATTGATGATGCTATTTCTAAATATGCTCGTGGTGATGGGTTGGAGGCAGTTGGGAATCAGTTGGCCATAATCTCTGAGAAGTTTGGCATCTCGGTTGAGTTTCATGGAGTGCCAGTCTTTGCTCAGGATGTGACGAGGGACATGCTTGATGTTAGGCCAGGTGAGGCTTTGGCTGTGAACTTTCCCCTGCAGCTCCATCATACAGCTGATGAGAGTGTTGATGTGAATAACCCAAGGGATGGACTTTTGAGATTGGTAAAGTCACTTTCTCCCAAGATAACCACATTGGTGGAGCAGGAATCAAACACAAACACAACTCCTTTCTTCAACAGGTTTATAGAAACCCTAGATTACTACATGGCAATTTTTGAGTCTATTGATGTCACCCTCCCAAGAAATAGCAAGGACCGGATTAATGTGGAGCAACATTGTTTGGCCAGGGATATCGTGAATGTTATTGCTTGTGAAGGGAAGGATAGGGTAGAGCGACATGAACTTTTTGGCAAGTGGAAGTCTAGGTTGACAATGGCTGGCTTTCATCAATATCCAATGAGCTCCTACGTAAATTCTGTTATAAGAAGGCTGCTGCAATACTATTCAGAGCATTATACACTAGTGGAGAAAGATAGGGCCATGTTGTTGGGGTGGAAGAGCAGAAACTTGATATCAGCCTCAGCGTGGCATTGA 1764 0.4524 MDSQQLFSYSVIGTGLASTSSHPTFSSLPSRLLGSLKVDIGNSPSSPFSTHFDSDSLSTLSDSQDKHSSGEILSGVSPSCNSLLETNNYLHRPASSVDCLQDGLHLYSARSSLLEDASCSQNVRHTLLELETALMAPDNGNETTTSNSSLGETERRGSMTSGNRNRSWSHDHQGLQYIQSQPSFVNSSRQSSEVAHVEKRRRSMEEALLQGFPSSNLRQLLIACAKALSENNTKDFDQLISKARNSVSIIGEPIQRIGAYFVEGLVARKEASGNNIYRALRCREPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWVTLLQALAARPGGAPHVRITGIDDAISKYARGDGLEAVGNQLAIISEKFGISVEFHGVPVFAQDVTRDMLDVRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKITTLVEQESNTNTTPFFNRFIETLDYYMAIFESIDVTLPRNSKDRINVEQHCLARDIVNVIACEGKDRVERHELFGKWKSRLTMAGFHQYPMSSYVNSVIRRLLQYYSEHYTLVEKDRAMLLGWKSRNLISASAWH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0920 587 MobiDBLite consensus disorder prediction 134 169 - -
Glsi04g0920 587 MobiDBLite consensus disorder prediction 48 74 - -
Glsi04g0920 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 175 583 IPR005202 -
Glsi04g0920 587 Pfam GRAS domain family 217 586 IPR005202 -
Glsi04g0920 587 ProSiteProfiles GRAS family profile. 208 587 IPR005202 -
Glsi04g0920 587 MobiDBLite consensus disorder prediction 137 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0920 Glsi-ChrGlsi04 7334661 7336424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0920 209 586 GRAS Transcription Factor Family AT5G48150 62.533 3.95e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi04g0920 GRAS 3.9e-128 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1164 14 12854835 12856580 Glsi04g0920 04 7334661 7336424 CCT
Glsi04g0920 04 7334661 7336424 Glsi04g0920 04 7334661 7336424 ECH