Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0919 ATGCATAAGGTCAGATGCATAAGGTGTCTCGAGGTGCTAGGCCCTTATAATTGTGGTCTGATGCATAAGGTGTCTCGAGGTGCTAGGCCCCCTAATGGCTATGATGCCAATCTTGTTGCCTCAGAGATGAGAAGGGATGGACATCTTCGTACATCAACGTTCAACCCGAACAATTTATATGCTGACTGGTTTAATTACATGAATGATGGCTATGTGGAAAGAATTCAAACGGCATGTTTAAGCATTACTGCCAACCTTGATATCAGCGACTTGGATGTTTCTAGATCCATTGGTGATTTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTCCGTGAACCTTTTAAAAGACCAATTTTGAGCTCTGAGCCATCGATTTCTGTTCATGAACTTCAGCAGCAAGATCAATTTCTCATATTTGCTTCTGATGGTAATAGCTGTGTCTCTTATTGGTGCATTCTATCATTCTGGAGGATTGAGCAGTACACTGGTCAATACTTGACTCAGCTTGTCTATGGACTTTTGCTTGTTGATGTGCTCATACATTTAGGTGTTTTGCTCATACATTTTGTGGGTGGTATTCAATGTGCATTCAGATTGGGAAATGAATGA 633 0.4044 MHKVRCIRCLEVLGPYNCGLMHKVSRGARPPNGYDANLVASEMRRDGHLRTSTFNPNNLYADWFNYMNDGYVERIQTACLSITANLDISDLDVSRSIGDLYLKKAEFNKEPLYAKFRLREPFKRPILSSEPSISVHELQQQDQFLIFASDGNSCVSYWCILSFWRIEQYTGQYLTQLVYGLLLVDVLIHLGVLLIHFVGGIQCAFRLGNE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0919 210 SUPERFAMILY PP2C-like 65 151 IPR036457 -
Glsi04g0919 210 ProSiteProfiles PPM-type phosphatase domain profile. 1 210 IPR001932 -
Glsi04g0919 210 Pfam Protein phosphatase 2C 73 151 IPR001932 -
Glsi04g0919 210 Gene3D - 65 156 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0919 Glsi-ChrGlsi04 7256061 7259924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0919 91 151 PP2C-type Phosphatase Gene Family AT5G66080 80.328 7.98e-29 107