Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0907 ATGGATGAGTATTCTCGGCCCAAGTTCAATGTTGCTGGTGCTATGGAATGGCTGTGCTTCCACATGAAAGGATACTTCAGTACTCTGGCATTCCAAATCTTTGCGTTGATTGCTGGGATCAATAGATTTCTATCTACCATCTTTATAATGGCTGCTAGACTCAAGTTTGAGAATTCGTGTGAAGTTGGGGTGTTTTCAAAACTTACCAACGCCTATTGTTTGGTTGCTCTTGGAGGCTCTGAAAATTTCTATAGTGCATTTGAGGCTGAGTTAGCAGATGTTATACCTATGGTGAAGGCATCCATTGCTGGTACACGTATTGTTGGTTGCCTTTGTGTTGTTATTACTGACACAGATGTGATGGTGGAAATGTATGAACGAGACCTGTTCTTTGAACTTCAACATTTGAGAAACAGCCTACCTGATCAAGTTGTTGTTCAACGTGTTGAAGAAAGATTATCTGCTCTAGGAAATTGTGTAGCATGCAATGATCATGAAGTAGAAATCCAAGCCCTTCCGGTAAGTTAA 528 0.4072 MDEYSRPKFNVAGAMEWLCFHMKGYFSTLAFQIFALIAGINRFLSTIFIMAARLKFENSCEVGVFSKLTNAYCLVALGGSENFYSAFEAELADVIPMVKASIAGTRIVGCLCVVITDTDVMVEMYERDLFFELQHLRNSLPDQVVVQRVEERLSALGNCVACNDHEVEIQALPVS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0907 175 Pfam eIF-6 family 53 166 IPR002769 GO:0042256|GO:0043022
Glsi04g0907 175 SUPERFAMILY Pentein 50 166 - -
Glsi04g0907 175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 50 167 IPR002769 GO:0042256|GO:0043022
Glsi04g0907 175 SMART eIF6neu2 52 171 IPR002769 GO:0042256|GO:0043022
Glsi04g0907 175 Gene3D - 48 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0907 Glsi-ChrGlsi04 6676900 6682841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0907 50 165 Eukaryotic Initiation Factors Gene Family AT3G55620 73.276 1.29e-55 174