Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0894 ATGGCTGAGACTCAGAGAATTTGCATTTCCAAAGAAGACCATATCAAAGAACCTTCTTCTTCTTCTTCTTCTCTACGTGCTAAAAAAGATTCCTTCTTTGACTTGAATGAAGAAGCTGTGGATGATGATAGCATTAGCATCAGTGACGATGCCCCATGTAGTAACAATGGCAGATCATCCTCTGGAGAAGGTAATTTGAGTAGCAATAATAATAATAACTCAAGTTCAGCTGAAGGTAAAGAGAGAACAAGCACCGTAAGGCAATATGTGAGGTCCAAAATGCCAAGGCTCCGTTGGACTCCTGATCTCCATCTGGCTTTTGTGCGTGCTGTTGAGAGGCTTGGTGGACAGGAAAAAGCCACACCCAAGTTAGTTCTCCAGCTGATGAATGTGAGAGGACTTAGCATTACACATGTAAAAAGTCATTTGCAAATGTATCGAAGCAAAAAACTTGATGAATCTGGCCAAGTTTTATCACAAAATAGAGCAATATTGCGAGAAAGAGATCATATTTTGGAGATGTACGAAAGATTTAATGCTCATGGGGGGATTGATACTAGAAACTATCCGCCATCATCTCTGATAATGAAGCCACCATTTGACTTCAAAAATCATGGCTCTTCAAGATTTCAGCCAGGGATTTACAACAAGATGGGAGTGTCTCACCTCCTTGATGTTAGGGATGCAATTATAACAAGAAAAGGAGGTCTTATTATTAGGCCTAGCCAATTTCTTGAAGACAAGAAGTGGCCTCCTCGTGAAATGGCTAGATCATCACAAGGAAATAATGACAAACGGGAATCCATAAGCATTTCTTGGGATGACAAACATAATATTAATGTTGGACAACGTTGTCCATGGAGCAACGCAACTAGCTTTATCAACAATCAATGCCAACGTACATCTTGCAGCCCCATCTTCTGTAGTCACGTGCATTTTGATCCCCAGGTTGATGATCTAAAATATGGAACGCTAAAGTTCACAAATGAAAATCATTTGTCACAACCAGGTGAGGTTACAGCCCAATTAGGGAGGTCGAAGGAGAAGAAGAAGGGATCACCCAGTTTTCTAAAGCTATGTTTAAGCCAATATTCTGCAAATAATGTCGGAGAGATCATGAACACAGGTAAAAGTAATGATCAAGGAGAAATCAATACGATGCTTTCTCTTTCATTATCCCCAGCCTCATCATCAAGGTCACAAGAATTAACAATGTAA 1218 0.4007 MAETQRICISKEDHIKEPSSSSSSLRAKKDSFFDLNEEAVDDDSISISDDAPCSNNGRSSSGEGNLSSNNNNNSSSAEGKERTSTVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSITHVKSHLQMYRSKKLDESGQVLSQNRAILRERDHILEMYERFNAHGGIDTRNYPPSSLIMKPPFDFKNHGSSRFQPGIYNKMGVSHLLDVRDAIITRKGGLIIRPSQFLEDKKWPPREMARSSQGNNDKRESISISWDDKHNINVGQRCPWSNATSFINNQCQRTSCSPIFCSHVHFDPQVDDLKYGTLKFTNENHLSQPGEVTAQLGRSKEKKKGSPSFLKLCLSQYSANNVGEIMNTGKSNDQGEINTMLSLSLSPASSSRSQELTM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0894 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 151 IPR017930 -
Glsi04g0894 405 Gene3D - 94 151 - -
Glsi04g0894 405 Pfam Myb-like DNA-binding domain 97 147 IPR001005 -
Glsi04g0894 405 MobiDBLite consensus disorder prediction 249 271 - -
Glsi04g0894 405 FunFam Myb family transcription factor 93 151 - -
Glsi04g0894 405 SUPERFAMILY Homeodomain-like 93 149 IPR009057 -
Glsi04g0894 405 MobiDBLite consensus disorder prediction 1 27 - -
Glsi04g0894 405 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 72 196 IPR046955 GO:0003700
Glsi04g0894 405 MobiDBLite consensus disorder prediction 43 86 - -
Glsi04g0894 405 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 150 IPR006447 GO:0003677
Glsi04g0894 405 MobiDBLite consensus disorder prediction 48 83 - -
Glsi04g0894 405 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0894 Glsi-ChrGlsi04 6571058 6573575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0894 57 266 G2-like Transcription Factor Family AT2G42660 40.506 1.38e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi04g0894 Myb_DNA-binding 2.8e-07 CL0123