Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0891 ATGGTATTGGACGAGATAGGAGATTTAGGGTCGAATGCTTGGATCTGCTGGCGTCGAATTTTACCGGCATTCTTTAACAATGGTCCTCATGTTTCTTTGGAACTTTTTGGTACTATGAGTTTTCATTACCAATTCGGTTCGGAATACGAGAACACTCTTCCTGAGTCACATGGACTCCAGCTTGAAGCTGTTGGAGCTTCTGAAGACATGGATGAGAGACGAGATGATGCAGGGCCAGCAGAGCAAGGGCCATCTAATTCTTCATGGTGGCCTTCAGATTTTGTTGAAAAGTTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAATAAGGAATCATCTAGAGATTCTGAGCAAGATGTTTTGTCACCTCAGAAAGCATCACAGGTTCTCTGGCGCACTGGAATGCTTTCAGAACCGATACCAAATGGTTTTTATTCAGTCATTCCGGAAAAAAGGCTAAAAGAACTTTTTGATAGTATTCCTACATTGGACGAGCTTCTTGCTTTGGGTGGAGAAGGTTTAAGAGCTGATATCATTTTAGTGGATGTGGAAAAAGATAAAAAGATATCTATGTTGAAGCAACTGATTGCGGCACTAGTTAAAGGATTGAACTCAAATCCAGCTGCGATAATTAAAAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGGCCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACCTCCCTCATGTTTGAGAATCGAGGTGTCCAGATGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGTGCAATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTTGAAAGCTGGCTCATGGAGGGTTTGCCGAATGATGGGGTTGTTGAATGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGCCAGTTAATACCACGATCAACCAAGGCAATTTTCATGACACATATTTCTGCAGCAGGGGAGAGTGATTCTGCAGAAAATGATTCATGTGATTCACTAGAACCAAACAGTCCTTTATATGGGGTTTCGGAGAAAGTGGATCCTGACAGCACTGAAAAAGAGGAGAACCTCCCATTCCAGAGGAAATTCGATGCATCTTCAAATGTATCAGGCCTGTCTTTGCGAGATCTGATGTTACGATCCAATACCAGTCTGGATAGGAAATTGAGTTTGTCTCATAGTGAACCGAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTCCGAGTACGTGGGCGGTCCCTGCTTAGTGGTGATAGGAAAGCATTTAGAGATTTTACTGATGAGGAGGCTATATCAAGATGCAGCTATAGATCAGATGGTGCATCCTCATCAGAAGCTCGAAGAATTAGAAGAAGAAGCATCAGCATTACCCCTGAAATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAAAATCGTCTTTTGAGAGAGCAAGGGGACGATAGTCCACTCTCCCATTCTCCAAATGATAGAAATAGCGTTGGAGATCTTCAGAAAAACGTGTCAAATTTCCATCTTGATGGTCACAATGATAGATCCGCTTTGTATTCTCTTCAAGGCAATCAAGTAACTTCTCAAAAGGCAATGTCATTACCCTCTTCACCACATGATTATAGGGGTCAAACATCTGAGAGAAGTGGGCTATCAAGATATGGAGTGAATAAATTGCAGTCAACGTGGATTAAAGTCCTTGAATCTTCAATGTTCAATAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTCTCAGAATTAACTGTCGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTCTTCCGTGGCGTGTGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCCGAAAACGTTGAAGATTTCTGCAATGAGATATCCATCCTCAGCCGACTCCGACATCCAAATGTAATTTTATTTCTTGGTGCGTGCACAAAGCCTCCACGCTTGTCAATGGTTACTGAATATATGGAGATGGGATCATTATATTACTTGATCCATTTGAGTGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGAGTAAAGATGTTGCGAGACATATGCAGGGGGTTGATGTGCATGCACCGTATGAAGATAGTTCACCGGGACCTGAAAAGTGCAAATTGTCTTGTGAACAAGCATTGGACTGTGAAGGTCTGTGATTTTGGTCTTTCAAGAATAATGACAGAGTCTCCCATCAAAGATTCTTCATCAGCTGGAACTCCGGAATGGATGGCTCCTGAACTTATTCGAAATGAACCATTCAATGAAAAATGTGATATCTTTAGCCTGGGGGTCTTAATGTGGGAGCTTTGCACTTTAAGTAGGCCATGGGAGGGCATACCACCAGAGAGGGTAGTTTATGCTGTTGCTAATGAAGGATCTAGACTGGAGATTCCTGAAGGCCCATTAGGCAGGCTGATTTCAGATTGTTGGGCTGAATCAAATGAGCGACCAAGTTGTGAGGTGATCCTTTCTCGCTTGCTGGAATGCGAGTACTCATTGTGCTGA 2664 0.4257 MVLDEIGDLGSNAWICWRRILPAFFNNGPHVSLELFGTMSFHYQFGSEYENTLPESHGLQLEAVGASEDMDERRDDAGPAEQGPSNSSWWPSDFVEKFGSVSLGSQEETLNNKESSRDSEQDVLSPQKASQVLWRTGMLSEPIPNGFYSVIPEKRLKELFDSIPTLDELLALGGEGLRADIILVDVEKDKKISMLKQLIAALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALDETSLMFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESWLMEGLPNDGVVECVDSYKHMSVIVVLNSVELLVDLMRCPGQLIPRSTKAIFMTHISAAGESDSAENDSCDSLEPNSPLYGVSEKVDPDSTEKEENLPFQRKFDASSNVSGLSLRDLMLRSNTSLDRKLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRVRGRSLLSGDRKAFRDFTDEEAISRCSYRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDDSPLSHSPNDRNSVGDLQKNVSNFHLDGHNDRSALYSLQGNQVTSQKAMSLPSSPHDYRGQTSERSGLSRYGVNKLQSTWIKVLESSMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENVEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRVKMLRDICRGLMCMHRMKIVHRDLKSANCLVNKHWTVKVCDFGLSRIMTESPIKDSSSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLEIPEGPLGRLISDCWAESNERPSCEVILSRLLECEYSLC 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0891 887 Pfam Protein tyrosine and serine/threonine kinase 632 878 IPR001245 GO:0004672|GO:0006468
Glsi04g0891 887 MobiDBLite consensus disorder prediction 67 92 - -
Glsi04g0891 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Glsi04g0891 887 MobiDBLite consensus disorder prediction 105 126 - -
Glsi04g0891 887 SUPERFAMILY Protein kinase-like (PK-like) 604 878 IPR011009 -
Glsi04g0891 887 MobiDBLite consensus disorder prediction 341 378 - -
Glsi04g0891 887 FunFam Serine/threonine-protein kinase isoform 1 621 709 - -
Glsi04g0891 887 Gene3D Phosphorylase Kinase; domain 1 624 709 - -
Glsi04g0891 887 MobiDBLite consensus disorder prediction 341 355 - -
Glsi04g0891 887 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 407 879 - -
Glsi04g0891 887 ProSitePatterns Protein kinases ATP-binding region signature. 637 658 IPR017441 GO:0005524
Glsi04g0891 887 CDD STKc_MAP3K-like 637 879 - -
Glsi04g0891 887 MobiDBLite consensus disorder prediction 529 547 - -
Glsi04g0891 887 MobiDBLite consensus disorder prediction 518 547 - -
Glsi04g0891 887 Gene3D Transferase(Phosphotransferase) domain 1 710 885 - -
Glsi04g0891 887 MobiDBLite consensus disorder prediction 569 589 - -
Glsi04g0891 887 Pfam Ethylene-responsive protein kinase Le-CTR1 127 323 - -
Glsi04g0891 887 SMART serkin_6 631 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0891 887 ProSiteProfiles Protein kinase domain profile. 631 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0891 Glsi-ChrGlsi04 6528103 6544020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0891 70 887 MAP Kinase Kinase Kinase AT3G58640 71.463 0.0 1193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Glsi04g0891 PK_Tyr_Ser-Thr 5.8e-60 CL0016