Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0889 ATGGATTCCCTCGTGGGAGCTTCGTCGAGGTCCTCTTCGTCGACTCTCACCGGCCGGGAAGATTGCTGGACGGAGGACGCCACCTACACTCTCATCGATGCTTGGGGCGAACGTCACATCCGCCTCAATCGCCGTAATCTCCGTCAGAACCACTGGCAGGAGGTCGTCGACGTCGTTAATGCCCGTCACGCCCACGTCAACAGGACGCGGTTAACCGACGTCCAGTGCAAGAACCGCATTGATACGCTTAAGAAGAAGTATGAGATCGAGAAGGCTACCGTTTCTCGATCTCAAGGCACCTACAGTAGCTCATGGCCTTTCTTTTATCCACTCGATGCTCTCATCGGAAATAATTCTTTACTGAAGAGGCACTCCCCGCCGGTCAACAGAAACCGCCTCAGTACGCCTCCGGCGAAGTCTCCTTCCTGGTTTACCTCGCACGTTCCAGTTGGCCCCCGATCACTAACTCAGAAACGGCCGTCGCCTGTGCCGGCAAGCATGGACGATTCCTATTTCCGACGGAACTTCTCGGCTTTTGCAGTGGCGGTGGCTGCGGCTGAGGCAGAGGACGCAGACATTGATGATTCGGGAGAATCGAGGTCGAGCGCTGCCGCTGGGAGTAGGAAGAGGGTTGGGGTAGGAGTCAGGGAAGGAGAGAGGAACAGAGACAGTGATAGGAGTTCGGAATTTGGGTATAGGAAGCTAGCACAGGCCATAGAGAGGTTTGGAAATATATATGAAAGCGTAGAAGCAGAGAAACAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAATTTGCTAGTGATTTGGAATTCCAGAGGATGCAGCTTTTCATGGAAACGCAGGTACAGCTTCAAAAAATAAAGCGTGCGAAGTGGTCTTCTCGGGGTGATTGGCTGCAAAGTGCTAATCCTGAATCAACATCAGGGGCTAGCGAATCACAATTCTGCATTAATCTGGTTGTATGGAAGGAAGTTGATATCATTAGTACATTGTATCGCTATACGAGTTAA 1017 0.5172 MDSLVGASSRSSSSTLTGREDCWTEDATYTLIDAWGERHIRLNRRNLRQNHWQEVVDVVNARHAHVNRTRLTDVQCKNRIDTLKKKYEIEKATVSRSQGTYSSSWPFFYPLDALIGNNSLLKRHSPPVNRNRLSTPPAKSPSWFTSHVPVGPRSLTQKRPSPVPASMDDSYFRRNFSAFAVAVAAAEAEDADIDDSGESRSSAAAGSRKRVGVGVREGERNRDSDRSSEFGYRKLAQAIERFGNIYESVEAEKQRQMVELEKQRMQFASDLEFQRMQLFMETQVQLQKIKRAKWSSRGDWLQSANPESTSGASESQFCINLVVWKEVDIISTLYRYTS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0889 338 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 293 IPR044823 -
Glsi04g0889 338 MobiDBLite consensus disorder prediction 212 228 - -
Glsi04g0889 338 MobiDBLite consensus disorder prediction 126 152 - -
Glsi04g0889 338 Coils Coil 246 266 - -
Glsi04g0889 338 MobiDBLite consensus disorder prediction 126 164 - -
Glsi04g0889 338 MobiDBLite consensus disorder prediction 190 228 - -
Glsi04g0889 338 FunFam trihelix transcription factor ASIL2 23 89 - -
Glsi04g0889 338 Pfam Myb/SANT-like DNA-binding domain 20 114 IPR044822 -
Glsi04g0889 338 Gene3D - 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0889 Glsi-ChrGlsi04 6511309 6512617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0889 6 291 Trihelix Transcription Factor Family AT3G14180 32.000 1.44e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi04g0889 Myb_DNA-bind_4 1.3e-21 CL0123