Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0884 ATGAAGAAAATCAATTTCGCCAGAGGCCACGTGGTCGAGGTTTGCAGCAAAGAAGATGGATTCGTAGGTTCTTATTACGAAGCCAGAGTGGTGTCCCAACTTGAGAATGGCCTCTACGTTGTGCAGTACAAGAACCTATTGGAAGATGACGAATCCCAGCCTTTGACTGAGACTGTGTACCCTAAGGAGCTTCGTCCTTTGCCACCCAAAATCCCCGTTAATGCTTCTGGGTTTTCGATGCACCAAAAGGTCGATGCTTTCGACAACGATGGTTGGTGGGTCGGCGTCATCACTGGGAAAAGAGACCCCAACTGCTACTGTGTCTATTTTGAAACCACCCACGAAGAGATCGCATACCCTTTGTCTCAGCTCAGGGTTCATCACGAATGGATCTATGGCAACTGGGTTTTGTCCAAGAAGCCTCAATTGAAGTAA 435 0.4782 MKKINFARGHVVEVCSKEDGFVGSYYEARVVSQLENGLYVVQYKNLLEDDESQPLTETVYPKELRPLPPKIPVNASGFSMHQKVDAFDNDGWWVGVITGKRDPNCYCVYFETTHEEIAYPLSQLRVHHEWIYGNWVLSKKPQLK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0884 144 CDD Tudor_Agenet_AtDUF_rpt1_3 6 69 - -
Glsi04g0884 144 Gene3D - 1 78 - -
Glsi04g0884 144 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 140 - -
Glsi04g0884 144 SMART agenet_At_2 76 132 IPR014002 -
Glsi04g0884 144 SMART agenet_At_2 4 72 IPR014002 -
Glsi04g0884 144 Pfam Agenet domain 9 69 IPR008395 -
Glsi04g0884 144 CDD Tudor_Agenet_AtDUF_rpt2_4 82 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0884 Glsi-ChrGlsi04 6464903 6465337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0884 16 130 PHD Transcription Factor Family AT5G58610 30.216 2.79e-12 61.2