Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0874 ATGGAAATATCAACAGATGAATGCCCAGAAACCCAGTATAAGATAATAACCAAAAAACTTTCTTACAGAATAGCTCCCCACGTAGATAAGCTCAGCTGCGTTTGCTGGGGGGAGAAACCCAGCAGAAGGAACATATTGAAGAATGTGGATTGTGAAGCTAGGCCAGGGGAGATCATGGCCATAGCTGGTCCAAGTGGAGCAGGAAAGACCACTCTGCTGGAGATACTAGCTGGGGTAATCCCACCAAGTAGAGTGTCTGGCCATGTTCTAGTGAATGAGTTGCCCTTGAATGCTCAACATTTTCGGACTGTTTCTGGCTATGTCACTCAGGATGAGGTCCTATTCCCGCTCCTTACTGCAGAGGAAACTCTCCTCTATAGTGCTCGCCTGAGATTGCAGGGTGGACCTGAGAGGGCCAAAGATAGAGTCAGAGAGCTATTGAAGGAACTTGAACTTGAGCATGTTGCTAATGTGAAAATTGGTGGTGAATCAAAGCGTGGCCTTTCAGGTGGTGAAAAACGTAGGATTTCAATTGGTGCTGATCTTGTGCATGACCCTGCTGTTCTTTTTCTTGATGAACCAACTTCAGGACTGGATTCGGCATCTGCACTCCTTATAGTCTTGTTGCTGAAATCAATGGCTACGAGACAAGGTAAGACAATTGTCTTAACAATCCACCAACCCAGTTTTAGAATTCTTGAACTTTTTAACCAGATTGTGTTACTAGCAAATGGAATCGTTCTTCATCATGGATCCATACATCTTCTCCACCAGCTGCTTAGATTTGCAGGCCATTGTGTACCTCAGCATGTTAATGTGCTTGAGTATGCAATTGAAGCAGCTGAATCTTTAGTCACAGATAGTGAAGAAAGTCAATTACAAGACCTTAAAATTGAACAAGAATATGAGGATAACAGAAGAACTATCAAGGTACGTAAGGCAGAAGAGCACACAATATGCTACTCCAACAGTCCATTCAGTGAGGTTTTAATTCTGGGTCATAGATTCTCCACTAACATTTTCAGAACCAGAGACCTCTTTGTTGCAAAGATCATTCAAGCAGTACTTGTCGGATTCGTGTTTGGGACTTTGTTTATAAATGCAACCAATGACTCAAGCAAATTCAAGTTGCAAAATCAAATAGGGTTTTTCGCAATCAGCATTGCCTTCTTGCTGTCCTCCATAACAGAAACTTTACCAATTTTTCTGCAGGAGAAGAGGATTGTAATGAGAGAAACCTCAAGAGGAGCTTATAGAATCTCTTCCTATGTGATATCAAACACATTGGTTTTCCTTCCATACCTACTAACTACTGCTCTTCTGTACACCTTCTCTGTCTACTGGCTAGTGGGTTTAAGGAGGGAAGTTGATGGATTTCTCTATTTTCTACTGGTGGTCTGGATGACTGTACTAATGGCAAACTCTTATGTTGCATTTTTTAGTACTGTTGTGCCAAATTACATCACGGGCATGCCTTTAGCCACAAGCATTATGGGGTCATTTTTCCTCTTTTCTGGGTATTTCATATCAAGAGAGGATATACCAAGGTATTGGATTTTCATGCATTACCTGAGTTTGTTTAAGTACCCGTTTGAGTGCTTTATGATAAATGAGCATGGAGGAGATAAAGGGGGAAGGAGATGTTTACAAAGTTTTGAGGGAGAATGTCTTCTGTATGGCAGTGAATTTCTGGAGGAGAGAGGCCTGAGACAGTCACAAAAATGGAGTCACTTGGGAGTGATGTTGGGTTTCTTCCTTGGGTATAGAGTTCTCTGTTTTTGTGTTCTGTGGTCCAAATCTTACAAAGCCAGAAGTTAG 1818 0.4186 MEISTDECPETQYKIITKKLSYRIAPHVDKLSCVCWGEKPSRRNILKNVDCEARPGEIMAIAGPSGAGKTTLLEILAGVIPPSRVSGHVLVNELPLNAQHFRTVSGYVTQDEVLFPLLTAEETLLYSARLRLQGGPERAKDRVRELLKELELEHVANVKIGGESKRGLSGGEKRRISIGADLVHDPAVLFLDEPTSGLDSASALLIVLLLKSMATRQGKTIVLTIHQPSFRILELFNQIVLLANGIVLHHGSIHLLHQLLRFAGHCVPQHVNVLEYAIEAAESLVTDSEESQLQDLKIEQEYEDNRRTIKVRKAEEHTICYSNSPFSEVLILGHRFSTNIFRTRDLFVAKIIQAVLVGFVFGTLFINATNDSSKFKLQNQIGFFAISIAFLLSSITETLPIFLQEKRIVMRETSRGAYRISSYVISNTLVFLPYLLTTALLYTFSVYWLVGLRREVDGFLYFLLVVWMTVLMANSYVAFFSTVVPNYITGMPLATSIMGSFFLFSGYFISREDIPRYWIFMHYLSLFKYPFECFMINEHGGDKGGRRCLQSFEGECLLYGSEFLEERGLRQSQKWSHLGVMLGFFLGYRVLCFCVLWSKSYKARS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0874 605 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524|GO:0016887
Glsi04g0874 605 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 269 IPR003439 GO:0005524
Glsi04g0874 605 FunFam ATP-binding cassette transporter 35 262 - -
Glsi04g0874 605 Gene3D - 27 315 IPR027417 -
Glsi04g0874 605 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 590 - -
Glsi04g0874 605 SMART AAA_5 55 245 IPR003593 GO:0016887
Glsi04g0874 605 Pfam ABC-2 type transporter 329 538 IPR013525 GO:0016020|GO:0140359
Glsi04g0874 605 Pfam ABC-2 type transporter 226 293 IPR043926 GO:0140359
Glsi04g0874 605 PRINTS Disease resistance protein signature 488 502 - -
Glsi04g0874 605 PRINTS Disease resistance protein signature 58 73 - -
Glsi04g0874 605 Pfam ABC transporter 46 196 IPR003439 GO:0005524
Glsi04g0874 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0874 Glsi-ChrGlsi04 6405866 6407683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0874 40 256 Calmodulin-binding Proteins AT2G36910 27.632 2.46e-11 65.1