Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0861 ATGGGTATGAAGAGCAGTGGAGGAGAGATTGTTCAAGTGCAAGGAGGCCACATTGTTCGATCCACTGGTAGAAAAGATCGTCACAGTAAGGTTTTTACTGCCAAAGGTCCTCGTGATCGAAGGGTTCGATTATCAGCTCAGACAGCCATTCAGTTCTACGATGTTCAAGACCAATGGAGGGTCAAGCGAAATGGCTATGGCGGAGCAGTCAGAGTTCCAGAGGCAATTGGGTGA 234 0.4829 MGMKSSGGEIVQVQGGHIVRSTGRKDRHSKVFTAKGPRDRRVRLSAQTAIQFYDVQDQWRVKRNGYGGAVRVPEAIG 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0861 77 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 65 IPR005333 GO:0003700
Glsi04g0861 77 ProSiteProfiles TCP domain profile. 24 77 IPR017887 -
Glsi04g0861 77 Pfam TCP family transcription factor 23 58 IPR017887 -
Glsi04g0861 77 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0861 Glsi-ChrGlsi04 6269744 6270105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0861 1 58 TCP Transcription Factor Family AT2G31070 77.778 2.78e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi04g0861 TCP 9.4e-17 No_clan