Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0856 ATGGCCCAATTGCCTCCCAAAATCCCTAACATGACATCCCCAAGTTGGCCTGATTTCTCTTCTCACCAGAAGATACCTTCCATGGCAAGTTTGTCGCCCAATGTTGTGGCCAACAACACCACCACGAACGCCGCCGCCGCGCAGAACCCTTCGTGGGTCGATGAATTCCTCGACTTCTCGTTGGCGAGACGCTGGGCCCACCGCCGGTCGGTGAGTGATTCCATCGCCTTTCTTGAGGCGCCAATGCTGGACGATTATCGTGGCAAAAGGTGCGCGGATGAGAACGAGTTTGACAGATTCGATGACGAGCAATTCATTTCCATGTTTACCGATGAGATTTCTGGGGCCGCCGCCATGCCACTCACCATCTCGTCTTCGAACCCTTCGAGCCCATCTGATCATAATAGCATTAACGATGAGAAAGAAACGAACCACCGTGGCCAGAACAGGGAGCTGAAGGATGATCAGAAGGATAATATTGGGAAGAAACAGCAGGACCAGAACCAGAACCAGAAGCAATTGAAAAATGAATCTGATGAGGTTGAAAGCCAATGCGAACGGGAAACACTACAAGCTCTAAATAACACAAATGCAACTTCTTCCAGTGACAAAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCACGAGTGAGGAAGCTGCAATACATATCAGAGCTAGAACGGAGTGTAACTTCATTACAGGCCGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTCTTAGATCATCAACGCTTACTTTTAAATGTTGACAATAGTGCTCTTAAGCAAAGAATCGCCACCCTTGCCCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCGCTGAAGAGAGAGATAGAGAGACTTAGGCAAGTATATCACCAACAAAACCTCAAAAAAATGGAAACTGGGGTGGCAGGATCAGCATCCCCATCACCAAATAATCCACATTCTAATGGTCTGACTGAAAAGGAACAGCTTCTCAACCTTTGA 1020 0.4696 MAQLPPKIPNMTSPSWPDFSSHQKIPSMASLSPNVVANNTTTNAAAAQNPSWVDEFLDFSLARRWAHRRSVSDSIAFLEAPMLDDYRGKRCADENEFDRFDDEQFISMFTDEISGAAAMPLTISSSNPSSPSDHNSINDEKETNHRGQNRELKDDQKDNIGKKQQDQNQNQKQLKNESDEVESQCERETLQALNNTNATSSSDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIATLAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMETGVAGSASPSPNNPHSNGLTEKEQLLNL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0856 339 MobiDBLite consensus disorder prediction 135 162 - -
Glsi04g0856 339 MobiDBLite consensus disorder prediction 121 186 - -
Glsi04g0856 339 SUPERFAMILY Leucine zipper domain 209 263 IPR046347 GO:0003700|GO:0006355
Glsi04g0856 339 SMART brlzneu 205 269 IPR004827 GO:0003700|GO:0006355
Glsi04g0856 339 Pfam bZIP transcription factor 209 252 IPR004827 GO:0003700|GO:0006355
Glsi04g0856 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 207 259 IPR004827 GO:0003700|GO:0006355
Glsi04g0856 339 MobiDBLite consensus disorder prediction 311 339 - -
Glsi04g0856 339 Gene3D - 208 281 - -
Glsi04g0856 339 CDD bZIP_plant_RF2 210 260 IPR044759 GO:0003700|GO:0006355
Glsi04g0856 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 212 227 IPR004827 GO:0003700|GO:0006355
Glsi04g0856 339 PANTHER BASIC LEUCINE ZIPPER 34 1 324 - -
Glsi04g0856 339 Coils Coil 288 308 - -
Glsi04g0856 339 FunFam Basic leucine zipper 61 208 281 - -
Glsi04g0856 339 Coils Coil 164 191 - -
Glsi04g0856 339 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0856 Glsi-ChrGlsi04 6244635 6246998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0856 1 286 bZIP Transcription Factor Family AT3G58120 58.000 1.19e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi04g0856 bZIP_1 3.1e-09 CL0018