Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0854 ATGCAAAGAAATAACAATGGGATACATCAAGCATGTTCTGCATGCAAGCATCAAAGGAAGAAATGTAGTGGAAACTGCGTATTGGCACCTTATTTTCCAGCAACCAAAAGCCGGGAGTTTAATGCTGTGCACAAAGTTTTTGGGGTTAGCAACATAACAAAACTAGTAAAGAGTGTCCCGAGAGAGGAAGATCGAAGGAGGCTAGTGACTTCATTGATATGGGAAGCATTTTGCAGGCAAAAAGATCCAATTCTAGGTTCTTATGGAGAATACGAAATACTATATAATGAGTACAGAAAGGTCTTGGCGCAGCTTATGATGTACAAAAACACTAATAATAACCAAATATTGCAGTTACCGTCGTCTGATCAAGGTGTTCTTGGATGGAATGAGAGCTGCAAAGGGATGCATAGAGGGGAAGGAGATGAGAATGATTTTAGATTTCTTGATCATGATCATCATAAGAATAATGGTATTATTGATTCTCCCATTTATAACTATCAATATTCAGATTACTCGCAAGATTTAGACAATTTGAAGCCAGAAATTGTCAACCCATTTCAGCACCACCATCAACCAGGCTATATTAATTCAGGAGGTCAATTCAATCAAATGAACAGCAAGAGCACGGAACCAGGCAGCATATGTGAGGGAGGGTTAAGTGTTCTTCTGCATTCAGCAAAAGAAATTAAAGAGATGTCATCTCTTGCAAATCACTGA 720 0.3861 MQRNNNGIHQACSACKHQRKKCSGNCVLAPYFPATKSREFNAVHKVFGVSNITKLVKSVPREEDRRRLVTSLIWEAFCRQKDPILGSYGEYEILYNEYRKVLAQLMMYKNTNNNQILQLPSSDQGVLGWNESCKGMHRGEGDENDFRFLDHDHHKNNGIIDSPIYNYQYSDYSQDLDNLKPEIVNPFQHHHQPGYINSGGQFNQMNSKSTEPGSICEGGLSVLLHSAKEIKEMSSLANH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0854 239 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Glsi04g0854 239 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
Glsi04g0854 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0854 Glsi-ChrGlsi04 6221125 6223198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0854 9 127 AS2 family AT1G06280 56.303 1.56e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi04g0854 LOB 1.6e-31 No_clan