Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0837 ATGCAGAGCAAGTTATCTGCAAATGTTATTGCTGGCTGCCGTCTAATCTATATCCATTTTAAAATAAGTGATGCTGTTCCTCTTCTTCTCAACATTGCTACTACCACTACTTTGTGGGAAAACGAAGAAATGACTCAGTGCAATAACCCAGAAAACGATAATCATAGCAATATCATTGTGCAGAGAAGAACTTGTCCTTCATGTGGCCATCATATCAAATGCCAAGACCAGGGTGGAATTCATGAGTTACCTGGGCTTCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGCTTCTTGAGCATTTGGAAGCGAAGGTGCGGTCTGATATTCACAAGCTTCATCCATTAATCGATGAGTTCATTCCTACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTAAGCAAAGATGGCCTGATACGCCATTTCTTCCACAGGCCATCCAAAGCATACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACTCAGAAGAAGATGGCAGCGAGACCCGTTGGCACAAAACAGGGAAAACCAGGCCAGTCTATATTACTGGCAAGTTGAAAGGTTACAAGAAGATTCTTGTGCTTTACACCAACTATGGGAAGCAAAGAAAGCCCGAGAAAACCAACTGGGTGATGCACCAGTACCACCTTGGCAATAACGAAGAGGAGAAAGAAGGAGAGTTAGTGGTTTCCAAGGTTTTCTATCAGACACAACCAAGACAATGTGGCTCACTTCTTCTGAAAGAAACATCATCGGTTTCTGCGAAACTAAAGGGACATGGTGTGCATCATGAGGTGGCAAATCATCACAAGAACAACAATGGGTTTGTTGAGTACTACAATTCTGCAGCATTTATATCCTTCGATCAAGGTGGCCAACATAGATCTACCACTGCACCGGTTGTTTCTCATTTTCCAATCCACGATGGGTCTCCTTTCATTCCTTGA 975 0.4338 MQSKLSANVIAGCRLIYIHFKISDAVPLLLNIATTTTLWENEEMTQCNNPENDNHSNIIVQRRTCPSCGHHIKCQDQGGIHELPGLPAGVKFDPTDQELLEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSEEDGSETRWHKTGKTRPVYITGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLLLKETSSVSAKLKGHGVHHEVANHHKNNNGFVEYYNSAAFISFDQGGQHRSTTAPVVSHFPIHDGSPFIP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0837 324 Pfam No apical meristem (NAM) protein 87 226 IPR003441 GO:0003677|GO:0006355
Glsi04g0837 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 49 261 IPR044799 GO:0003700
Glsi04g0837 324 ProSiteProfiles NAC domain profile. 86 245 IPR003441 GO:0003677|GO:0006355
Glsi04g0837 324 FunFam NAC domain-containing protein 73 95 249 - -
Glsi04g0837 324 SUPERFAMILY NAC domain 81 245 IPR036093 GO:0003677|GO:0006355
Glsi04g0837 324 Gene3D NAC domain 95 249 IPR036093 GO:0003677|GO:0006355
Glsi04g0837 324 MobiDBLite consensus disorder prediction 159 180 - -
Glsi04g0837 324 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0837 Glsi-ChrGlsi04 6001851 6006954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0837 63 324 NAC Transcription Factor Family AT4G28500 63.475 5.47e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi04g0837 NAM 1.2e-22 No_clan