Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0836 ATGCTTCTCCTTCTTTTGCTTCTCTTTCTCTTTCCTCCACCCCTTACTCTCTCTCTAACCCAGGACGGTCGCTTCCTCTACCAAGCCAAGCTTCAACTTTCCGACCCCTCTAATGCTCTCTCCAACTGGAACGACCGCGATGCCTCCCCATGCGGCTGGTTCGGCGTCGCCTGTGACCCAGTCACCGGCGAGGTCAATTCCCTTAACCTCTCCAACTCACAGCTCGCCGGTCCCTTCCCCACTGTCCTCTGCCGCCTCCCTTCTCTCGCATTCCTCTCATTCTTCAACAACTCGATCAACTCTTCTCTCACCGCTGATATCGCCAATTGTAGCCATCTCCAGTATCTCGACCTCTCCGAGAACGCCCTCGTGGGTCTCATACCGGAAACGCTTTCTCAAATCCCGACTCTCCGTTACCTTGACCTCTCTTTCAATAATCTCTCCGGTGATGTCCCGGTGAGTTTCGGTGAGTTCCGGCGGCTCGAATCGCTTAAGCTCGTTTTTAATTTTCTGAACGGAACTATACCCAGTTCTCTTGGTAACATTTCCACCCTCAAAGAGCTTCAACTTGCTTATAACCCCTTCACCCGGAATCCAGTACCGGTGGAATTCGGTAACCTGACGAATCTCGAGGAACTATGGCTCGCTTCGTGTAACTTCGTGGGTTCGATTCCGCCATCATTGGGTCGTCTTACTCGGCTTAAAAACCTCGACTTCTCCACGAACAAACTCAATGGTTCTATTCCGAAGTCAATCGTAGGCTTGAAAAGCGTCGTTCAAATTGAAATTTATCAAAACTCGCTTTCCGGCCAGTTACCTGAAGGAATGTCGAACTTAACGAGTCTGAAACGATTCGATGCGTCGATGAACAAGTTGATTGGGACGATTCCTGATGAATTGTGCCGGTTGGAGCTCGAATCTCTTAATTTGTATAATAATAGACTTGAAGGATCTTTGCCAGAGAGTATAGCTCGGTCTCCGAATTTGTACGAGCTCAAATTGTTTAACAACAAGCTTACTGGGCGATTGCCGTCTGCTCTCGGTAATAACTCGCGTCTGGTGAATCTGGACGTTTCGTATAATCAGTTTTTTGGTGAAATACCAGATAATTTGTGTGAAGGGCGCAAGTTGGAAGAGTTGATTTTGATATACAATTCATTTTCTGGAGAAATTCCCCAGAGTCTGGGGGCGTGTAGGAGCTTAACCAGGGTTCGGCTTAGAAATAACAATCTCTCAGGCATGGTTCCTGAAGCTCTCTGGGGTCTACCTCATCTGTATCTGCTTGAGCTTATTCATAATTCTCTATCTGGGCAAATTTCCAGTGCAATATCTGGTGCTCGGAATCTGTCAGTTTTGCTAATTACGAAAAACCAGTTTTCTGGGTCGATACCTGAAGAGATTGGGTCATTGGATAATCTTGTTGAATTTGTTGGCAGCCAAAATAATTTTACAGGTCATATTCCGGCCAGTATGTTCAAGTTGAGTCAGTTGGGCAGGCTTGATCTCAGTGACAATGAACTATCAGGAGCAATTCCAGGAGGAATTCGTGATTGGAATAATCTCAATGAGCTAAATTTGGGAAACAATAGGTTTGATGGGAAAATTCCAAACGAAATAGGGAGCTTGCCGGTCCTTAATTACCTTGATCTTTCTAACAATCGGTTCTCTGGTGAAATTCCACTTCAGCTGCAAAATTTGAAGCTCAATTTGCTGAATTTGTCCAACAATCAGCTTTCTGGGAACATCCCTCCTCTTTATGCTAATGAGAATTATAGAAAGAGTTTTCTAGGAAATCCAGGCCTCTGTGGCGATCTCTATGGACTTTGTCCGAGTTTTGGTGAAAGTAAGAACCGGAGGTATGTGTGGGTTTTCCGGTCTATATTTGTACTTGCTGGTATTGTATTTGTTGTTGGGGTTGCCTGGTTTTACTTGAAATACCGAAACTTCAAGAAGATGAACAAGGGAATGAACATGTCAAAGTGGAGGTCATTTCATAAATACGGCTTCAGTGAGTTTGAGATTGTCAAATTGCTGAATGAAGATAACGTAATTGGGAGTGGAGCATCTGGGAAGGTCTACAAAGTGGTGCTTAGTAATGGTGAGGTCGTGGCAGTGAAGAAACTCTGGAGAGCAACTAAGAGAGAAGATGGAAGTGTAGGTTCAGAAAAAGATGAATTTGAAGCTGAAGTTGAAACATTGGGAAAGATCCGACACAAGAATATTGTAAGGCTATGGTGTTGCTGCAACAATGGGGATAGCAAGCTTCTAGTTTATGAATATATGCCTAATGGGAGCTTGGCTGATTTGTTGCACAGTAGCAAGAAAAGCTTGTTGGATTGGCCAACCAGGTATAAAATTGCTATAGATGCTGCTGAGGGACTTTCTTACTTGCATCACGATTGTGTCCCACCAATTGTCCATAGGGACGTAAAATCTAACAATATATTGTTAGATGGAGAGTTTGGGGCAAAAGTTGCAGACTTTGGAGTTGCCAAAATGTTCGGGGGAGTCAGCCAAGGCGCAGAATCCATGTCTGTGATTGCGGGATCTTATGGTTACATTGCACCAGAATATGCCTATACTCTTCGGGTAAACGAAAAGAGTGATATCTATAGCTTTGGGGTGGTTATTCTGGAGTTGGTAACTGGGAAACCCCCGGTTGATTCTGAGTATGGAGATGAAGATTTGGTAAAATGGGTTTCCACCACCTTGGATCGGAAAGGACTCGACCACGTGATTGATCCCAGTCTTAACTCCAAATACAAAGAAGAAATCAGTAAAATACTCAACATGGGGCTTCTTTGCACCAGCTCTCTTCCTATTACCCGACCTTCCATGCGGAGAGTGGTGAAAATGCTGCAGGAGGCATCTGCAGATCCCAAATCCAGAAGTGGGAAGAGGGATGGGAAACTCTCCCCTTATTATCATGAAGAGGCCTACGATCAGGGAAGCATAGTTTGA 2961 0.4482 MLLLLLLLFLFPPPLTLSLTQDGRFLYQAKLQLSDPSNALSNWNDRDASPCGWFGVACDPVTGEVNSLNLSNSQLAGPFPTVLCRLPSLAFLSFFNNSINSSLTADIANCSHLQYLDLSENALVGLIPETLSQIPTLRYLDLSFNNLSGDVPVSFGEFRRLESLKLVFNFLNGTIPSSLGNISTLKELQLAYNPFTRNPVPVEFGNLTNLEELWLASCNFVGSIPPSLGRLTRLKNLDFSTNKLNGSIPKSIVGLKSVVQIEIYQNSLSGQLPEGMSNLTSLKRFDASMNKLIGTIPDELCRLELESLNLYNNRLEGSLPESIARSPNLYELKLFNNKLTGRLPSALGNNSRLVNLDVSYNQFFGEIPDNLCEGRKLEELILIYNSFSGEIPQSLGACRSLTRVRLRNNNLSGMVPEALWGLPHLYLLELIHNSLSGQISSAISGARNLSVLLITKNQFSGSIPEEIGSLDNLVEFVGSQNNFTGHIPASMFKLSQLGRLDLSDNELSGAIPGGIRDWNNLNELNLGNNRFDGKIPNEIGSLPVLNYLDLSNNRFSGEIPLQLQNLKLNLLNLSNNQLSGNIPPLYANENYRKSFLGNPGLCGDLYGLCPSFGESKNRRYVWVFRSIFVLAGIVFVVGVAWFYLKYRNFKKMNKGMNMSKWRSFHKYGFSEFEIVKLLNEDNVIGSGASGKVYKVVLSNGEVVAVKKLWRATKREDGSVGSEKDEFEAEVETLGKIRHKNIVRLWCCCNNGDSKLLVYEYMPNGSLADLLHSSKKSLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKMFGGVSQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPVDSEYGDEDLVKWVSTTLDRKGLDHVIDPSLNSKYKEEISKILNMGLLCTSSLPITRPSMRRVVKMLQEASADPKSRSGKRDGKLSPYYHEEAYDQGSIV 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0836 986 SUPERFAMILY RNI-like 67 412 - -
Glsi04g0836 986 Gene3D Transferase(Phosphotransferase) domain 1 761 975 - -
Glsi04g0836 986 ProSiteProfiles Leucine-rich repeat profile. 567 589 IPR001611 GO:0005515
Glsi04g0836 986 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Glsi04g0836 986 FunFam Receptor-like protein kinase HSL1 304 611 - -
Glsi04g0836 986 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 182 - -
Glsi04g0836 986 ProSiteProfiles Protein kinase domain profile. 678 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0836 986 FunFam Leucine-rich receptor-like protein kinase family protein 200 298 - -
Glsi04g0836 986 SUPERFAMILY L domain-like 368 589 - -
Glsi04g0836 986 Gene3D Ribonuclease Inhibitor 277 611 IPR032675 -
Glsi04g0836 986 Pfam Leucine rich repeat 481 531 IPR001611 GO:0005515
Glsi04g0836 986 Pfam Leucine rich repeat 109 147 IPR001611 GO:0005515
Glsi04g0836 986 SMART LRR_typ_2 279 303 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 86 110 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 207 231 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 542 565 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 111 133 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 398 421 IPR003591 -
Glsi04g0836 986 SMART LRR_typ_2 494 518 IPR003591 -
Glsi04g0836 986 MobiDBLite consensus disorder prediction 954 973 - -
Glsi04g0836 986 SMART serkin_6 678 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0836 986 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Glsi04g0836 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 181 955 - -
Glsi04g0836 986 Gene3D Ribonuclease Inhibitor 173 275 IPR032675 -
Glsi04g0836 986 Gene3D Ribonuclease Inhibitor 21 172 IPR032675 -
Glsi04g0836 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Glsi04g0836 986 Gene3D Phosphorylase Kinase; domain 1 661 760 - -
Glsi04g0836 986 SUPERFAMILY Protein kinase-like (PK-like) 677 954 IPR011009 -
Glsi04g0836 986 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 761 970 - -
Glsi04g0836 986 FunFam Receptor-like protein kinase HSL1 661 760 - -
Glsi04g0836 986 Pfam Protein kinase domain 680 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0836 Glsi-ChrGlsi04 5998009 6001409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0836 14 986 Receptor kinase-like Gene Family AT1G28440 63.019 0.0 1242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi04g0836 Pkinase 2.9e-46 CL0016