Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi04g0833 | ATGGGTGTGGACTATTACAAGATCTTGCAGGTTGATAAGAATGCCAAAGATGACGACTTGAAGAAGGCTTATAGGAAGCTTGCCATGAAATGGCATCCTGATAAGAACCCAAATAACAAGAAGGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTATGACGTGCTCAGTGATCCTCAGAAGAGAGCTGTCTATGATCAATATGGCGAAGAGGGTATGAAGGGTCAGGTTCCGCCTCCTGATGCTGGTGGAGCTTCTTTCTTTTCGACGGGAGATGGGCCAACGTCGTATCGCTTCAATACCCGGAGCGCCGATGACATTTTTGCCGAGTTTTTTGGGTTCTCAAGCCCGTTTGGAGGGATGGGTGGGATGGGTGGAGGCGGTGGTCATGGCGGCATGAGGTCGAGGTTCTCTAGTGGGATTTATGGTGATGATATGTTTGCATCTTTTGGTGAAGGAGGAGGAGTCCATATGAATCCAGTTGCTCCTCGCAAAGCTCCTCCCATTGAGAACAGGTTGCCCTGTAGTCTCGAAGATTTATATAAAGGGACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCCAGTGGCAAAACCATGCCGGTGGAGGAGATCTTAACTATTAATGTCAAGCCTGGTTGGAAGAAGGGCACAAAGATAACCTTTCCGGAGAAGGGAAACGAGCGGCCGAATGTGGCACCTGCTGACCTTGTTTTCATCATTGATGAAAAACCCCATAGTGTCTTCACTCGTGATGGAAATGATCTCATTGTCACCCAGAAGATTTCGCTAGCAGAGGCCTTAACCGGTTATACGGTGCAACTCACTACCCTGGATGGCAGAAATTTAAGCATACCAATCAACAATGTTATCCATCCCAGCTACGAGGAGGTTGTTCCAAGAGAAGGAATGCCACTTCAAAAGGATCCAACAAAGAAGGGGAACTTAAGGATAAAGTTCAACATTAAGTTTCCAACTCGGCTCACTGCTGAGCAGAAGGTAGGAATCAGGAAACTCTTGGGTGCTTCACCATAA | 1044 | 0.4646 | MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGMKGQVPPPDAGGASFFSTGDGPTSYRFNTRSADDIFAEFFGFSSPFGGMGGMGGGGGHGGMRSRFSSGIYGDDMFASFGEGGGVHMNPVAPRKAPPIENRLPCSLEDLYKGTTKKMKISREIADASGKTMPVEEILTINVKPGWKKGTKITFPEKGNERPNVAPADLVFIIDEKPHSVFTRDGNDLIVTQKISLAEALTGYTVQLTTLDGRNLSIPINNVIHPSYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPTRLTAEQKVGIRKLLGASP | 347 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0833 | 347 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
| Glsi04g0833 | 347 | FunFam | DnaJ subfamily B member 13 | 249 | 329 | - | - | |
| Glsi04g0833 | 347 | SUPERFAMILY | Chaperone J-domain | 3 | 127 | IPR036869 | - | |
| Glsi04g0833 | 347 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
| Glsi04g0833 | 347 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
| Glsi04g0833 | 347 | Gene3D | - | 249 | 329 | - | - | |
| Glsi04g0833 | 347 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
| Glsi04g0833 | 347 | CDD | DnaJ_C | 168 | 331 | - | - | |
| Glsi04g0833 | 347 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Glsi04g0833 | 347 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Glsi04g0833 | 347 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Glsi04g0833 | 347 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
| Glsi04g0833 | 347 | FunFam | DnaJ subfamily B member 13 | 3 | 123 | - | - | |
| Glsi04g0833 | 347 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 343 | - | - | |
| Glsi04g0833 | 347 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 164 | 256 | IPR008971 | GO:0006457|GO:0051082 | |
| Glsi04g0833 | 347 | Gene3D | DnaJ domain | 3 | 123 | IPR036869 | - | |
| Glsi04g0833 | 347 | Gene3D | - | 169 | 247 | - | - | |
| Glsi04g0833 | 347 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 251 | 336 | IPR008971 | GO:0006457|GO:0051082 | |
| Glsi04g0833 | 347 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
| Glsi04g0833 | 347 | FunFam | Dnaj homolog subfamily b member | 166 | 247 | - | - | |
| Glsi04g0833 | 347 | Pfam | DnaJ C terminal domain | 170 | 328 | IPR002939 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi04g0833 | Glsi-ChrGlsi04 | 5943528 | 5945899 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi04g0833 | 5 | 69 | C2H2 Transcription Factor Family | AT1G74250 | 39.130 | 7.71e-10 | 58.2 |