Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0817 ATGGCAGTCATGTCGCCCATATTGCCCATTACTGTGCATGCTCCAGCTGAGAAAGGGGCATCTGCTTTTTTAGTGGATTTCCTGATGGGAGGAGTGTCTGCTGCTGTATCTAAGACAGCAGCTGCCCCAATTGAACGGGTTAAATTGCTTATTCAAAATCAGGATGAGATGATTAAAAGTGGTCGATTGTCTGAACCATACAAGGGAATAAGTGATTGTTTTGCCCGAACCATGAAGGATGAAGGTGTCCTGGCTCTCTGGAGAGGAAACACTGCCAATGTTATCAGATACTTCCCTACCCAGGCTCTGAACTTTGCTTTTAAGGATTATTTCAAGAGGCTTTTTAACTTTAAAAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCCTCTGGTGGGGCTGCTGGGGCTTCCTCTCTCTTGTTTGTCTATTCTTTGGACTATGCAAGAACTCGATTGGCAAATGATGCAAAAGCTGCAAAGAAGGGTGGTGAGAGGCAGTTCAATGGCTTGGTTGATGTTTACAAGAAAACCATCAAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTCAACATCTCATGTGTTGGAATCATAGTATATCGTGGTCTTTACTTTGGAATGTATGATTCTCTGAAACCAGTAGTTTTGGTTGGTGGGATGCAGGATAGTTTCTTTGCAAGTTTTCTTCTGGGATGGGGGATCACAATAGGTGCCGGTTTGGCTTCTTACCCTATTGACACAGTCCGTAGAAGGATGATGATGACTTCCGGTGAAGCTGTGAAATACAAGAGCTCTCTGGATGCATTCAAGATAATCATCAAGAATGAGGGTTCTAAGTCACTCTTTAAAGGTGCTGGTGCAAACATTTTACGTGCTGTTGCAGGTGCTGGTGTGCTTGCTGGTTACGACAAGCTCCAGCTCGTACTGTTTGGAAAGAAATATGGTTCCGGCGGTGGTTAA 972 0.4434 MAVMSPILPITVHAPAEKGASAFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGISDCFARTMKDEGVLALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTIKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGMQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKIIIKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0817 323 PRINTS Adenine nucleotide translocator signature 126 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 PRINTS Adenine nucleotide translocator signature 23 35 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 PRINTS Adenine nucleotide translocator signature 67 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 PRINTS Adenine nucleotide translocator signature 231 247 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 PRINTS Adenine nucleotide translocator signature 100 112 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 312 IPR018108 -
Glsi04g0817 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 21 114 IPR018108 -
Glsi04g0817 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 218 IPR018108 -
Glsi04g0817 323 Pfam Mitochondrial carrier protein 125 218 IPR018108 -
Glsi04g0817 323 Pfam Mitochondrial carrier protein 23 118 IPR018108 -
Glsi04g0817 323 Pfam Mitochondrial carrier protein 226 314 IPR018108 -
Glsi04g0817 323 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 21 322 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Glsi04g0817 323 Gene3D Mitochondrial carrier domain 24 319 IPR023395 -
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 89 109 IPR002067 GO:0055085
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 26 39 IPR002067 GO:0055085
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Glsi04g0817 323 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Glsi04g0817 323 SUPERFAMILY Mitochondrial carrier 23 308 IPR023395 -
Glsi04g0817 323 FunFam ADP,ATP carrier protein, mitochondrial 24 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0817 Glsi-ChrGlsi04 5809159 5811162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0817 8 314 Antiporters AT4G28390 89.577 0.0 546