Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0810 ATGGCCGGCAGAGAGATCCTCCATAAGATGAAGGTGAAAGCAGTGTGTGGAATATCAATACCTGACACAGGGAAAGGAAAAAGCAAAATGTCAAAGCATATCACGCAGGGCTTTCACTTGGTGAAGGGAAAATCAGGTCACGCTATGGAAGACTATTTAGTTTCAGAATTTAAGCAAGAGAAGGACAAAGAGTTAGGCTTGTTTGCAATATTTGATGGTCATTTAGGCCATGACGTTGCAAACTATTTGCAGAACCACCTTTTTGACAACATCTTAAAGCAGGATGACGTCTGGACTGAAACAGAAATTGCAGTAAAGAGAGCTTACCTTATAACAGATGAGAAAATACTGGAACAAGCACTTGTGTTGGGACGAGGAGGATCAACTGCAGTAACTGCAATACTTATTAATGGTCAGAAACTTGTAGTAGGAAATGTTGGAGACTCTCGAGCTGTTATTTCCAAGAATGGCAAGGCGAAGCAACTGTCCATCGATCATGAGCCAAGCAAGGAAAAAAGAATGATCGAGAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGAGATGTCCCTCGTGTAGATGGACAGCTGGCGGTTGCAAGGGCTTTTGGTGATAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGACTTTAGAGAATGTAGAAGAAGATACAGAGTTCCTTATTCTGGCAAGTGATGGAATATGGAAGGTTATGTCAAATCAAGAAGCAGTTGATTCTATTAGACACATAAAGGATGCTCAGGCTGCAGCAAAGCACTTGATAGAAGAGGCTGTTGCTAGGAAAAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA 852 0.419 MAGREILHKMKVKAVCGISIPDTGKGKSKMSKHITQGFHLVKGKSGHAMEDYLVSEFKQEKDKELGLFAIFDGHLGHDVANYLQNHLFDNILKQDDVWTETEIAVKRAYLITDEKILEQALVLGRGGSTAVTAILINGQKLVVGNVGDSRAVISKNGKAKQLSIDHEPSKEKRMIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVTLENVEEDTEFLILASDGIWKVMSNQEAVDSIRHIKDAQAAAKHLIEEAVARKSKDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0810 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Glsi04g0810 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Glsi04g0810 283 PANTHER PROTEIN PHOSPHATASE 35 282 IPR015655 GO:0004722|GO:0006470
Glsi04g0810 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Glsi04g0810 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Glsi04g0810 283 CDD PP2Cc 37 282 IPR001932 -
Glsi04g0810 283 Gene3D - 21 283 IPR036457 -
Glsi04g0810 283 SMART PP2C_4 31 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0810 Glsi-ChrGlsi04 5773297 5775699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0810 1 283 PP2C-type Phosphatase Gene Family AT3G15260 72.318 1.06e-146 411