Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0793 ATGAGAGAGTTTTTGTCTGAGATTTCAAGTTTAGGCAGATTGAAGCATAGAAATGTGGTGCCATTGAGAGGTTGGTGTAAGAAAGAGAAAGGAAGTTTGATTGTAGTTTATGATTATATGAACAATGGAAGTTTAGACGGAAGGATATTTGATGGTGGCGAGAACACAGTTCTGACATGGGAGGAAAGAATCAAGGTGTTAAAGGATGTGGCTCAGGGATTATTGTATTTGCACGAGGGTTGGGACGTTAAGGTCTTGCATAGAGACATCAAGGCAAGCAATGTATTACTTGATAAATATATGAATGCTAGGTTGGGGGATTTCGGACTAGCTCGAATGTATCATCACGAGGAGCCGGGTAATACCACGCGAGTGATTGGGACTGTTGGGTACATGGCACCTGAACTTGTTCGAACAGGGAGAGCTTCAACTCATACTGATATCTTCAGTTATGGGGTGTTGGTTTTAGAGGTGGTGTGTGGAAGAAGACCAACTGAACAAGATAAGCCGGGATTGGTTGCTTGGGTATGGAGGCTAATGGAGAGAAGAGAATTATGTTGTGCTCTTGATGAGCGCCTAAAGTGGAGGAGTGAATTTGACACTGCCGAAGCTGAGAGGGTTCTTCATCTTGGTTTGTTGTGCACACACCCTGACCCTCTGGTTAGGCCAACTATGAGACAGGTTGTGAAGGTGCTACTGGAAGGAGAGAGTATGGATATGAGCTTGCTTGACAAAATAAACTCGGCAGCCACCTCTTATGCTGGAAGCTTTGGTAAAACTATTCACCCAACAGTTGAGGAAATTTCCCTGTCCTATTTCTCTTTCACAAGATCGATTCAGGAGGGTCGATGA 852 0.4401 MREFLSEISSLGRLKHRNVVPLRGWCKKEKGSLIVVYDYMNNGSLDGRIFDGGENTVLTWEERIKVLKDVAQGLLYLHEGWDVKVLHRDIKASNVLLDKYMNARLGDFGLARMYHHEEPGNTTRVIGTVGYMAPELVRTGRASTHTDIFSYGVLVLEVVCGRRPTEQDKPGLVAWVWRLMERRELCCALDERLKWRSEFDTAEAERVLHLGLLCTHPDPLVRPTMRQVVKVLLEGESMDMSLLDKINSAATSYAGSFGKTIHPTVEEISLSYFSFTRSIQEGR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0793 283 PANTHER - 1 235 - -
Glsi04g0793 283 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0793 283 FunFam L-type lectin-domain containing receptor kinase S.4 40 245 - -
Glsi04g0793 283 PIRSF ILK 1 244 - -
Glsi04g0793 283 Gene3D Transferase(Phosphotransferase) domain 1 41 251 - -
Glsi04g0793 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Glsi04g0793 283 Gene3D Phosphorylase Kinase; domain 1 1 40 - -
Glsi04g0793 283 SUPERFAMILY Protein kinase-like (PK-like) 2 232 IPR011009 -
Glsi04g0793 283 SMART serkin_6 2 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0793 283 Pfam Protein kinase domain 3 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0793 Glsi-ChrGlsi04 5623655 5624506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0793 1 188 Receptor kinase-like Gene Family AT4G04960 68.063 1.51e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi04g0793 Pkinase 8.3e-41 CL0016