Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0792 ATGTCTCCTCTTAGCTTCTTCTTCTTCCTGAACACAGCTCTTGTTATAGTTTCAGTGTCTGCAACAACATCTACTGAATTTGTCTATAACAGAGACTTCAACTCCACCAATATCCTCCTCTCTGGTAATGCCACCATCCAAAATTCCATTCTTACTCTCACCAACCAGACCTTCTTCTCCATAGGCCGTGCCTTTTACCCTCACAAAATACCCATGAAATTACCCAACTCTTCCTCTCCTCTTCTTCCCTTTGCAACCTCTTTCATCTTCTCCATTGCTCCTTTTGAAGACTTGCCCACTGCTCATGGCTTTGCTTTCATATTCTCACCTACAATGGCCATAACTGGTGTAACCTCGGGAAATTATCTGGGCCTTTTCAATCTCTCCAACGAAGGTAATTCTTCAAACCATGTTTTTGGTATTGAGTTTGATGATTTCAGAAACGAAGAATTTGATGATAAGAATGATAATCATGTGGGTGTTGACTTGAATTCACTCAATTCCTGGGATTCACAACCTGCTGGGTTCTGGGTTGGAAGAGATGGTGAAAAATTGGAGGAGCTGGAACTGGATAATGGTAGAAACTATCAAGTCTGGGTAGAGTTTTCCGATTCACATCTTAATGTTACTATGGCTCCTGCAGGGACAAAGAAGCCTCAGAAACCATTGATTAGTAGGCATATTGACCTTTCTGGGGTTTTGTTAGATGAAATGTATGTTGGGTTTTCTGGAGCAACAGGGAAAATGGTGGACATATGCAGAATTCTGGCTTGGAGTTTCAGCACTTCGAACTTTTCTATTGGTGATGCTTTGCTGACTAAAAATTTACCCTCTTATGTGCATCCAAAGTTGCTGATATTCAGATCAAAAAAGTTCATTCTAGGTGTCATTTTTGGTACTCTGTTTGTCACTGGCTGTTGCACTTTGGTGTTCCTGAGTTTATTCAAAACCAGAAGAAAGACCGAAGGAGAAGAAAAAATTGAAGATTGGGAATTGGAGTATTGGCCACACAGGATTAGCTACGGAGAGATTAATGCTGCAACAAGAGGATTCTCTGAAGAGAAAGTGATTGGGATGGGAACAAGTGGGAAAGTGTATAAAGGAGTTTTACAAGGAGCAGAAGTTGCAGTGAAGAGAATCCCCCATGACACACAGCACGGGATGAGAGAGTTCTTTGCTGAGATTTCAAGCCTAGGTAGAATGAAACACAAAAACTTAGTGGGTTTCAGAGGCTGGTGCAAAAGAAAAAGAGGAAACTTGATACTGGTTTATGATTACATGGAAAATGGGAGCTTGGACAAGAAGATTTTCGACTGTGATGAGAGCAAGCTGCTGAGTTGGGAAGAAAGAATCAGTGTTCTACAAAACGCAGCTTGTGGAATTTCCTACCTACACGATGGTTGGGAAGTTCCAGTATTGCATAGAGACATCAAGGCAGGCAATGTGCTTCTGGACAAAGATATGAATGCTAGATTAGGTGATTTTGGCCTTGCCAGATTGCATCACCAAGAGCACTTGGCTGATGCGACAAGAGTAATAGGGACTCTAGGGTACATGGCACCAGAGCTGGTTAAAATTGGGAGACCCTCAACTGCAACCGATGTTTATAGTTTTGGGATATTGGTTTTGGAAGTGGTTTGTGGGAGAAGACCCATTGTAGCAGATAAGCCAACACTGGTTGACTGGGTTTTTAGCCAAATGGAGAGTGGCAAACTGTGTTGTACAGTTGATGAGCGTTTGAAGGGTCAAGGTGGATTCAACATTCAGGAAGCCGAGAGAGTGCTTCATTTGGGATTGTTATGTGCTAGTTCAGACCCTACTGATAGGCCAACAATGAGGCAGTTGGTGAAAACGTTGGAGGGAATTAGAGGTAGTGAGTGTAGTAAGGAACAGTGTGTTGATGTGAGTTTGCTTGAAAAGATCAAATCAGCAGCAATGTGGTCTAGGAGTGAAACCGGCTCTACTGATGCAAGTTATCCTACTTTTGAGGATATTTTGCAGTCCAAATTTTATAGCACAACATCTCGAAGTGACTCTAATCCTCTCCTACAATCAGAGTCAACCTGTGTTTCAGAAGGAAGAGCTCTCTTTCTTGGGGTCAGCATCTACCTCTCCTCCTTTGCTCAACCGTACTTTTCCTCCTCAAAGTTCTTCCTTTGTTCTTCCAGGCCGCCCTTGCAAATGTCCCCTTTTACTCTAATCTACCTTATCCTCCTTCACTCTGCAACCACACTGAGCTCATTGTCAGCAACTGAATTCGTTTATAACAAAAACTTCAACTCTACTAATATATTCCTCTGTGGCAACGCCACTGTTCAGTCATCCATTCTGGTTCTCACCAATCGGAGTTTCTTCTCCATAGGTCGTGCTTTTTACCCTATCAAAATACCCACCAAAGCAGCTAGCTCTTCCACCCTTCTTCCTTTTGCCACTTCCTTCATTTTCTCTATTGCCCCCGTTAAGCATTTTCTCACTGGTCATGGCTTTGCCTTCATTTTCTCACCATCTAAGGGCTTAAACGGCACAACCTCATCTCAGTACATTGGCCTTTTAAATTTCACCAATCAAGGTAATCCTCAAAACCATGTTTTTGGAGTTGAGTTTGATGTCAGGAAAAATGTGGAGTTCAATGATATAAACGACAATCATGTTGGTGTAGACATAAACTCTCTTACTTCCTTAACTTCACATGGGGCTGGTTATTGGGGAGGAAAAGATGATAAGGAATTTAAGCAGTTAATGTTAAACAATGGGGTAAATTATCAGGTCTGGATCGAATTTATAGATTCATGGCTTAATGTCACTATGGCTAAAGCAGGAACAAAAAGGCCTAGGAGGCCTTTGATTAGTAAAAATGTTAACCTTTCTGAGGTTCTTTTGGATGAAATGTATGTTGGGTTTTGCGCATCAACAGGGCTATTGATGGACACTCCTAGAATCATGGCTTGGAGTTATAGCAATTCAAATTTTTCAATTGGTGATGCTTTGATAACAACCGATTTGCCTTATTTTGTGCATCAGAAAGGGTTGCTTTCTGGATCAAGAGCTCTTGTTATAGGGTTTATTGTTGTCTGCATAACAATCACTGGCTGTGTATCGGTGGTGTGTTTCTTTTTATGGAGTGGGATAGGCGAAAAAGCAGAAGAATTAGAAGAATGGGAGTTGGAGTACTGGCCCCATAGGATTAGTTATCAAGAGATTGATGCAGCAACAAGTGGGTTCTCAGAAGAGCAAGTGATTGGGATTGGAGGGAATGGGAAGGTATATAAAGGGGTTTTGCAGGGAGTAGAAGTTGCAGTCAAGAGAATCTCCCGTGAAACAGAGGAAGGGACGAGAGAGTTTTTGACTGAGGTTTCAAGCTTAGGCAGAATGAAACACAGAAATCTGGTTGGCTTCAGAGGTTGGTGTAAAAGAGAAAAGGGAAGCTTGATATTAGTCTATGAGTATATGAACAATGGAAGTTTAGACAAATGGATTTATGATTGTGAAAAAAGAAAGATGCTAAGTTGGGAAGAAAGGATTGAAATTCTAAAGAATGTAGCTGCTGGGATTCTATACCTGCATGAGGGTTGGGAAGTTGAGGTTTTGCACAGAGACATAAAATCCAGCAATGTGCTTCTTGACAAAAATATGAAAGCCAGGTTAGGGGATTTTGGATTGGCTCGGATGCATGATAATCATGGGCAAATAGTCAGCACAACAAGAGTAATTGGGACTGTAGGATACATAGCCCCAGAAGTGGTTCGAGCAGGGAGAGCCACAACTCAATCTGATGTGTTCGGTTTCGGAATACTGGTTTTAGAAGTAGTTTGTGGGAGAAGACCCATTGAAGGAGGTAAGCCAGGGGTGACTGAGTGGCTACTGTCCCTAATGGAGATTGGTGAGTTGCACAGTGCTATTGATGATAGATTGAAGGCCGAAGGTAGATGTACCATTGAGGAAGTGGAGAGAATGCTCCGTTTGGGTTTACTTTGTGCAAATTCAGACCCTAATGTCAGACCCACAATGAGGCAAGTGGTTAATTTGCTGGAGGGGGAATCTGAAGGTAATGAGACAGAACAGAACAGTGTGGGAATGAGTTTGCTTGAGAAAATAAAATCAGCAGCAATGTGGTCTGAAACTGCTTTTACTTTTCCTAACAGAGGATACCCTACAATAGACGAGATTCTGTTCTTCAGCTCTAATTCTAAAACGTCTAAAAGTAGCTCATATGCCATCCCAGATTCAGAGATCATCCGTGAAGGAAGGTAG 4251 0.4194 MSPLSFFFFLNTALVIVSVSATTSTEFVYNRDFNSTNILLSGNATIQNSILTLTNQTFFSIGRAFYPHKIPMKLPNSSSPLLPFATSFIFSIAPFEDLPTAHGFAFIFSPTMAITGVTSGNYLGLFNLSNEGNSSNHVFGIEFDDFRNEEFDDKNDNHVGVDLNSLNSWDSQPAGFWVGRDGEKLEELELDNGRNYQVWVEFSDSHLNVTMAPAGTKKPQKPLISRHIDLSGVLLDEMYVGFSGATGKMVDICRILAWSFSTSNFSIGDALLTKNLPSYVHPKLLIFRSKKFILGVIFGTLFVTGCCTLVFLSLFKTRRKTEGEEKIEDWELEYWPHRISYGEINAATRGFSEEKVIGMGTSGKVYKGVLQGAEVAVKRIPHDTQHGMREFFAEISSLGRMKHKNLVGFRGWCKRKRGNLILVYDYMENGSLDKKIFDCDESKLLSWEERISVLQNAACGISYLHDGWEVPVLHRDIKAGNVLLDKDMNARLGDFGLARLHHQEHLADATRVIGTLGYMAPELVKIGRPSTATDVYSFGILVLEVVCGRRPIVADKPTLVDWVFSQMESGKLCCTVDERLKGQGGFNIQEAERVLHLGLLCASSDPTDRPTMRQLVKTLEGIRGSECSKEQCVDVSLLEKIKSAAMWSRSETGSTDASYPTFEDILQSKFYSTTSRSDSNPLLQSESTCVSEGRALFLGVSIYLSSFAQPYFSSSKFFLCSSRPPLQMSPFTLIYLILLHSATTLSSLSATEFVYNKNFNSTNIFLCGNATVQSSILVLTNRSFFSIGRAFYPIKIPTKAASSSTLLPFATSFIFSIAPVKHFLTGHGFAFIFSPSKGLNGTTSSQYIGLLNFTNQGNPQNHVFGVEFDVRKNVEFNDINDNHVGVDINSLTSLTSHGAGYWGGKDDKEFKQLMLNNGVNYQVWIEFIDSWLNVTMAKAGTKRPRRPLISKNVNLSEVLLDEMYVGFCASTGLLMDTPRIMAWSYSNSNFSIGDALITTDLPYFVHQKGLLSGSRALVIGFIVVCITITGCVSVVCFFLWSGIGEKAEELEEWELEYWPHRISYQEIDAATSGFSEEQVIGIGGNGKVYKGVLQGVEVAVKRISRETEEGTREFLTEVSSLGRMKHRNLVGFRGWCKREKGSLILVYEYMNNGSLDKWIYDCEKRKMLSWEERIEILKNVAAGILYLHEGWEVEVLHRDIKSSNVLLDKNMKARLGDFGLARMHDNHGQIVSTTRVIGTVGYIAPEVVRAGRATTQSDVFGFGILVLEVVCGRRPIEGGKPGVTEWLLSLMEIGELHSAIDDRLKAEGRCTIEEVERMLRLGLLCANSDPNVRPTMRQVVNLLEGESEGNETEQNSVGMSLLEKIKSAAMWSETAFTFPNRGYPTIDEILFFSSNSKTSKSSSYAIPDSEIIREGR 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0792 1416 CDD lectin_legume_LecRK_Arcelin_ConA 751 988 IPR001220 GO:0030246
Glsi04g0792 1416 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Glsi04g0792 1416 SUPERFAMILY Protein kinase-like (PK-like) 1051 1344 IPR011009 -
Glsi04g0792 1416 ProSitePatterns Protein kinases ATP-binding region signature. 1080 1101 IPR017441 GO:0005524
Glsi04g0792 1416 CDD STKc_IRAK 1080 1345 - -
Glsi04g0792 1416 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Glsi04g0792 1416 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Glsi04g0792 1416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Glsi04g0792 1416 Pfam Protein kinase domain 1075 1341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 FunFam L-type lectin-domain containing receptor kinase S.4 1150 1356 - -
Glsi04g0792 1416 SMART serkin_6 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 SMART serkin_6 1074 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 PANTHER - 768 1347 - -
Glsi04g0792 1416 Pfam Legume lectin domain 751 989 IPR001220 GO:0030246
Glsi04g0792 1416 Pfam Legume lectin domain 25 264 IPR001220 GO:0030246
Glsi04g0792 1416 ProSiteProfiles Protein kinase domain profile. 351 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 266 IPR013320 -
Glsi04g0792 1416 Gene3D Transferase(Phosphotransferase) domain 1 427 642 - -
Glsi04g0792 1416 Gene3D Transferase(Phosphotransferase) domain 1 1150 1366 - -
Glsi04g0792 1416 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 1041 1149 - -
Glsi04g0792 1416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1195 1207 IPR008271 GO:0004672|GO:0006468
Glsi04g0792 1416 Gene3D - 749 996 - -
Glsi04g0792 1416 Gene3D - 23 271 - -
Glsi04g0792 1416 Gene3D Phosphorylase Kinase; domain 1 1043 1149 - -
Glsi04g0792 1416 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Glsi04g0792 1416 CDD STKc_IRAK 357 622 - -
Glsi04g0792 1416 FunFam L-type lectin-domain containing receptor kinase S.4 23 268 - -
Glsi04g0792 1416 FunFam L-type lectin-domain containing receptor kinase S.4 427 631 - -
Glsi04g0792 1416 ProSiteProfiles Protein kinase domain profile. 1074 1362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi04g0792 1416 FunFam L-type lectin-domain containing receptor kinase S.4 749 993 - -
Glsi04g0792 1416 SUPERFAMILY Concanavalin A-like lectins/glucanases 750 990 IPR013320 -
Glsi04g0792 1416 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0792 Glsi-ChrGlsi04 5611798 5618165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0792 23 575 Receptor kinase-like Gene Family AT4G04960 53.929 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi04g0792 Pkinase 1.6e-48 CL0016