Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0762 ATGGAGAGAGCGAGCGGAAAGGTATTGGTGCGACGGAACAGTGGCAAATCCGTTAAGGGTGTTGACGACACTCAGAAGGTTACCCAGATGGGAGAAAGCCAAGATTGGGAGATTAATGAGGCTTTCGTGTCACATAGGCCTCTTAAGAAGACATGCAGCCCCGAAGAACGTCAAACCCCAACTCAATCCTCTGCTTCTCTGCAACGTCCTTCTTCTACAGCTTCATCGTCTTCAAGAATCATGTTTCCTTTTGCTGTTGATGGGTTTCAACAATCTGGAACCCCGAATTTGCCTCAGTTTCCTCCACCCATTCATCAGCAACCGACGATATCTTTCGGGTTCCAACAACAAAACATTGGGTACCCACAATTCTTAGCCCCAGATTCAGTGGTTTCACAGCAACAGCAACAACATCAGCAGCATCTTCTTCAGTATTGGAGTGACACACTGAATCTGAGTCCAAGAGGAAGAATGGCAATGATGAACAGATTAGGGCCAGATGGTAGGCCATTGTTTAGGCCTCCAGTACAGCCATTGCATACTACTAAGCTCTACAGGGGAGTGAGGCAGCGTCATTGGGGCAAATGGGTAGCCGAAATTCGTCTCCCTCGCAATAGGACTCGCCTCTGGTTAGGCACATTTGACACGGCAGAAGATGCTGCTATGGCATATGATCGTGAGGCTTTTAAGCTGAGAGGAGAGAATGCTAGGCTCAATTTCCCAGAGCTCTTTCTCAATAAGGATAAAGCACCTTCAACAACTCCAAATTCAGCTGCTGCTTCTCCCCAAAAGCAACCTGAGCCAGTTCCAGAAGAGAATACAGGGAATGATTTAGGAACTGGGTCGAGTGATGCTAAAGTGGGTGACGAAGTTCAGGCCGGTGCTGAAAAAGGGGAAATCATTTCAGAGTCAGAGGAATCCATTTGGGGGGATATAGCAGCTTGGTTCAATGCAATTCCGGCCGGTTGGGGTCCTGGCAGCCCCGTGTGGGATGATTTGGACACCACCAATAATATCCTGATGCAGTCACAACTTCCTTCAGTCAATCCAAATCAGCAAGAAGATAACACAGGACCAGGTTGTTTCACTTCCTCTTCTTCTTGTCCCATGAAGCCTTTCTTCTGGAAGGGTCAAGATTGA 1140 0.4781 MERASGKVLVRRNSGKSVKGVDDTQKVTQMGESQDWEINEAFVSHRPLKKTCSPEERQTPTQSSASLQRPSSTASSSSRIMFPFAVDGFQQSGTPNLPQFPPPIHQQPTISFGFQQQNIGYPQFLAPDSVVSQQQQQHQQHLLQYWSDTLNLSPRGRMAMMNRLGPDGRPLFRPPVQPLHTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKAPSTTPNSAAASPQKQPEPVPEENTGNDLGTGSSDAKVGDEVQAGAEKGEIISESEESIWGDIAAWFNAIPAGWGPGSPVWDDLDTTNNILMQSQLPSVNPNQQEDNTGPGCFTSSSSCPMKPFFWKGQD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0762 379 MobiDBLite consensus disorder prediction 346 379 - -
Glsi04g0762 379 MobiDBLite consensus disorder prediction 54 76 - -
Glsi04g0762 379 ProSiteProfiles AP2/ERF domain profile. 184 241 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 38 333 - -
Glsi04g0762 379 MobiDBLite consensus disorder prediction 346 371 - -
Glsi04g0762 379 CDD AP2 183 243 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 Pfam AP2 domain 185 233 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 MobiDBLite consensus disorder prediction 1 76 - -
Glsi04g0762 379 FunFam Ethylene-responsive transcription factor 2 183 242 - -
Glsi04g0762 379 MobiDBLite consensus disorder prediction 20 35 - -
Glsi04g0762 379 Gene3D AP2/ERF domain 184 242 IPR036955 GO:0003700|GO:0006355
Glsi04g0762 379 SMART rav1_2 184 247 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 SUPERFAMILY DNA-binding domain 184 242 IPR016177 GO:0003677
Glsi04g0762 379 PRINTS Ethylene responsive element binding protein signature 207 223 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 PRINTS Ethylene responsive element binding protein signature 185 196 IPR001471 GO:0003700|GO:0006355
Glsi04g0762 379 MobiDBLite consensus disorder prediction 246 286 - -
Glsi04g0762 379 MobiDBLite consensus disorder prediction 249 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0762 Glsi-ChrGlsi04 5418918 5420057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0762 146 332 AP2-EREBP Transcription Factor Family AT2G20880 59.474 3.94e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi04g0762 AP2 2.4e-13 CL0081