Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0757 ATGTCCCAACAACCATACCAACTCAGCACCACATACATGGCCTGGAAAATTGGGAAGAGGCAAGGAGTAGGATCGAATTTTGTGCCATGTGAGCTATATTCTCATCCCATATTTATTGTTCTTTATAAAGAGGTGCTTGCTTCTCTTTTTGGGTATCAGAAAGAAAGAGATATAAGAAAAATGGAACAAAATAATGATACAATGGGAGAAGAGGCATTAATGTTACAAGGCCAAGCTGATATATGGAAGTACATGCTCAGCTTCGCAGATTCCATGGCCCTCAAATCTGCTGTAGAGCTCCGCATACCCGATATCATTCACCTCCACGGTGGACCAATCACCTTAGCCGAGATCATTGCTGGTCTTTCCGATGCACCCTCCCCAGACATCAACTGCCTCGCACGAATTATGAGGCTACTGGTGCGCAGGAAGATCTTCACCGCTCATCACCCCTCTGACGGCGGAGACACTCTTTACGGGCTGACCCACTCTTCAAGATGGCTCTTACGTGACTCCGAGACGAGTCTAGCCCCCATGTTTCTTATGGAGAACCATCAATGGCTTCTGGCCCCATGGCACTGTCTGAGCCAGTGTGTGAGAGAAGGTGGGGTCGCCTTCAAGAAGGCTCGTGGAAGTGATATTTGGGAGTTTGGATCAGAGAACCCAGAGTTCAACAAGCTGTTCAACGATGGGATGGCGTGTACGGCTAAGGTCGTGATGAGGGCGATCGTGTCTGGGTATAAAGATGGGTTCGAGAGCATAGGATCACTGGTGGATGTAGGAGGTGGGATCGGAGGGACAGTGTCGGAGATTGTGAAATCCTATCCGCACATCAAATGCACCAACTTTGATCTGCCGCATGTGGTTGCGACGGCACCTCAATACGAGAGAGTCGCCCATGTTGGAGGAGACATGTTCCACTCAATTCCTAATGCCGACGCGGTTTTTATGAAGTGGATATTGCATGATTGGGACGACGAAAATTGCATAAATATATTGAAAAACTGCAAGAAAGCAATACCAGAAGAGAGAGGGAAGGTAATAATAGTAGAGTTTGCTCTGAAACCGGAGGGTAATGGCATCTTCGATGACACTGGGTTAGCGTTTGATTTGCTTATGATTGCACATACCTCTGGTGGAAGGGAAAGGACCGAGTTGGAATGGAAGAAGATATTGGAACAAGCTGGGTTCCCTCGTTATAAGATCATCACAATTCAAGCTTTGGTATCTATCATTGAGGCTTATCCGATTTGA 1254 0.4697 MSQQPYQLSTTYMAWKIGKRQGVGSNFVPCELYSHPIFIVLYKEVLASLFGYQKERDIRKMEQNNDTMGEEALMLQGQADIWKYMLSFADSMALKSAVELRIPDIIHLHGGPITLAEIIAGLSDAPSPDINCLARIMRLLVRRKIFTAHHPSDGGDTLYGLTHSSRWLLRDSETSLAPMFLMENHQWLLAPWHCLSQCVREGGVAFKKARGSDIWEFGSENPEFNKLFNDGMACTAKVVMRAIVSGYKDGFESIGSLVDVGGGIGGTVSEIVKSYPHIKCTNFDLPHVVATAPQYERVAHVGGDMFHSIPNADAVFMKWILHDWDDENCINILKNCKKAIPEERGKVIIVEFALKPEGNGIFDDTGLAFDLLMIAHTSGGRERTELEWKKILEQAGFPRYKIITIQALVSIIEAYPI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0757 417 PANTHER O-METHYLTRANSFERASE 75 401 IPR016461 GO:0008168
Glsi04g0757 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 415 IPR029063 -
Glsi04g0757 417 SUPERFAMILY "Winged helix" DNA-binding domain 72 172 IPR036390 -
Glsi04g0757 417 Gene3D - 62 168 IPR036388 -
Glsi04g0757 417 Gene3D Vaccinia Virus protein VP39 170 415 IPR029063 -
Glsi04g0757 417 FunFam O-methyltransferase family protein 170 415 - -
Glsi04g0757 417 Pfam O-methyltransferase domain 192 397 IPR001077 GO:0008171
Glsi04g0757 417 Pfam Dimerisation domain 92 141 IPR012967 GO:0046983
Glsi04g0757 417 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 82 416 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0757 Glsi-ChrGlsi04 5384013 5389812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0757 92 413 Monolignol Biosynthesis Gene Families AT5G54160 40.854 4.23e-81 252