Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0756 ATGGCTTCAATGAAAGGTACACCAACACTACTATCTGAGGCTTCCCTAAAGAGCCAAGCACTTATCTTGGAAACCCTTTTCAGTTTTGTAGACGCTATGGCACTAAAATGTGCTGTGGAACTCCGCATAGCCGATATCATACACTCCCACGGTGGACCAATCACGTTGTCCCAGCTGGCTGCCTCCTTGGAGGAATCTCCCTCCCCAAATATTCCCTACCTCTTCCGCATCATGAGATCGCTGGTTCGCAAGAAGATCTTCACCGCGCATCATCCATCCGACGGTGGGGATACCCTCTACGGGTTGACAGACGCGTCCAAGTGGCTCCTACATGGGTCACAGTTCAGCCTCGCTCCAATGGTCATCATGGAGAACCATCCCGTTCAACTGGCTCCGTGGCAACGTCTGAGTCAGTGTGCTAGAGAGGGCGGGGTCGCGTATGAGAAGGCTCATGGGTGCGGGATTTGGGACTTCGCATCCAAGAACCCAGAGTTCAACAAGGTGTTCAACGATGCTATGGCGTGCATGGTGAAGTTCATCATGGAAGCGATCCTATCTGAGTATAAAGATGGGTTCGGCAGCATAGGATCATTGGTGGACGTGGGAGGTGGCACTGGTGGTGTCATAACTGAGATCGTCAAATCCTATCCGTACATCAAAGGAATCAACTTTGATCTGCCACATGTCATCGCCACGGCAAATCATCACCCAGGAGTTACTCATGTAGGAGGCGACATGTTTGAGGCCATTCCCACAGCTGATGCTTGTCTTCTCAAGTGGATTCTGCACGACTGGAGTGATGAGGATTGCATAAAGATTCTGCAGAACTGCAAAAAGGCAGTGGCAGAGAAGAAAGGGAAGATTATTATTGTGGATGGTGTGTTGGAAGAAGCGGGTAGTGGAGTTTTTGATGAGATGACAATGATATTTGATCTGGTTATGATGGCACACACAACAGGAGGAAAGGAGAGAACTGAAGCTGAATGGATTAAGTTATTGGAGGAAGCAGGTTTCGCTCGTTACAATATCATCAAACTCCCCACACTACCATCCATTATTGAGGCTTACCTTATTTGA 1077 0.4875 MASMKGTPTLLSEASLKSQALILETLFSFVDAMALKCAVELRIADIIHSHGGPITLSQLAASLEESPSPNIPYLFRIMRSLVRKKIFTAHHPSDGGDTLYGLTDASKWLLHGSQFSLAPMVIMENHPVQLAPWQRLSQCAREGGVAYEKAHGCGIWDFASKNPEFNKVFNDAMACMVKFIMEAILSEYKDGFGSIGSLVDVGGGTGGVITEIVKSYPYIKGINFDLPHVIATANHHPGVTHVGGDMFEAIPTADACLLKWILHDWSDEDCIKILQNCKKAVAEKKGKIIIVDGVLEEAGSGVFDEMTMIFDLVMMAHTTGGKERTEAEWIKLLEEAGFARYNIIKLPTLPSIIEAYLI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0756 358 Gene3D Vaccinia Virus protein VP39 111 356 IPR029063 -
Glsi04g0756 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Glsi04g0756 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 357 IPR016461 GO:0008168
Glsi04g0756 358 PIRSF O-mtase 3 357 IPR016461 GO:0008168
Glsi04g0756 358 Pfam Dimerisation domain 33 82 IPR012967 GO:0046983
Glsi04g0756 358 Pfam O-methyltransferase domain 133 339 IPR001077 GO:0008171
Glsi04g0756 358 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Glsi04g0756 358 PANTHER O-METHYLTRANSFERASE 17 340 IPR016461 GO:0008168
Glsi04g0756 358 Gene3D - 9 109 IPR036388 -
Glsi04g0756 358 FunFam O-methyltransferase family protein 111 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0756 Glsi-ChrGlsi04 5377524 5378866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0756 33 344 Monolignol Biosynthesis Gene Families AT5G54160 39.623 8.47e-77 239