Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0751 ATGGAAGGCACGCAAACACTACTGTCAGAGGCTTCCCTAAAGAGCCAAGCATTTATCTTGGACACCCTTTTCAGTTTTGTGGATTCTGTGGCACTAAAATGTGCTGTGGAGCTCCGCATAGCAGATATCATACACTCCCACGGTGGCCCAATCACATTGTCCCAGCTGGCTACCTCCTTGGGGGAATCTCCCTCCCCAAATATCCCCAACCTCCTCCGCATCATGAGATTGCTGATCCGCAAGAAGATCTTCACCGCGCATCATGCATCCGATGGCGGGGACACTCTCTACGGGTTGACAGAGGCGTCGCAGTGGCTCCGACATGGGTCCCAGTTCAGCCTTGCCCCAATGGTGATGATACAGAACCATCCATTGCAGCTGGCTCCGTGGCACCACCTGAGCCAGTGTGCGAGAGTGGGTGAGGTCGCCTTCGAGAAGGCTTTTGGGTGCGGGATTTGGGACTTCGCATCCAAGAACCCAGAGTTCAACAAGCTTTTCAACGATGTGATGGCGACCTTGGCGAAGTTCATCATGGAAGCGATTCTATCTGAGTACAAAGATGGGTTCGGCAGCATAGGATCATTGGTGGACGTGGGAGGTGGCACTGGTGGGGTCATAACTGAGATCGTCAAATCCTATCCGCACATCAAAGGAATCAACTTTGATCTGCCACATGTCATCGCCACAGCAAATCACCACCCTGGAGTCACCCATGTTGGAGGCGACATGTTTCAGGCCATTCCTAGTGCTGATGCTGTTCTTCTCAAGTGGCAGAAGAAAGGGAAGATTATTATTGTGGAGATAGTGTTAGAAGCTGAGGGTGGTGGAGTGTTTGATGAGACAAGAATGACATTGGATTTGCATATGATGGCATACACAGCAGGAGGAAAGGAGAGAAGTGAAGTTGAATGGGATAAGTTATTAAAGGAAGCAGGCAATGGAGCCGAACATATCTTGATTAGGCGCAAGTTATGCTATCTGAGTGGCTTTGAGCTTGCTGAAGTAAGATTTCAAGAATTTTTTATGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGCGATGTCCATGTATTACTTGATGCAAATAGAGAACTCCTCTATATAGATGTTTTCTCTTTAAAGTTTTCTGCTTTTCTTTATGCTATATTTTCTGTATTTCTGTGA 1173 0.4757 MEGTQTLLSEASLKSQAFILDTLFSFVDSVALKCAVELRIADIIHSHGGPITLSQLATSLGESPSPNIPNLLRIMRLLIRKKIFTAHHASDGGDTLYGLTEASQWLRHGSQFSLAPMVMIQNHPLQLAPWHHLSQCARVGEVAFEKAFGCGIWDFASKNPEFNKLFNDVMATLAKFIMEAILSEYKDGFGSIGSLVDVGGGTGGVITEIVKSYPHIKGINFDLPHVIATANHHPGVTHVGGDMFQAIPSADAVLLKWQKKGKIIIVEIVLEAEGGGVFDETRMTLDLHMMAYTAGGKERSEVEWDKLLKEAGNGAEHILIRRKLCYLSGFELAEVRFQEFFMLSEWHSHCILLWDCDVHVLLDANRELLYIDVFSLKFSAFLYAIFSVFL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0751 390 Gene3D - 3 106 IPR036388 -
Glsi04g0751 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 312 IPR029063 -
Glsi04g0751 390 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Glsi04g0751 390 Gene3D Vaccinia Virus protein VP39 107 320 IPR029063 -
Glsi04g0751 390 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Glsi04g0751 390 PANTHER O-METHYLTRANSFERASE 19 312 IPR016461 GO:0008168
Glsi04g0751 390 Pfam O-methyltransferase domain 259 312 IPR001077 GO:0008171
Glsi04g0751 390 Pfam O-methyltransferase domain 130 257 IPR001077 GO:0008171
Glsi04g0751 390 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 257 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0751 Glsi-ChrGlsi04 5314481 5320332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0751 30 312 Monolignol Biosynthesis Gene Families AT5G54160 35.161 8.55e-60 196