Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0749 ATGGCTTCAATGAAAGGTACACCAACACTACTGTCTGAGGCTTACCTAAAGAGCCAAGCACTTATCTTGGAAACCCTTTTCAGTTTTGTGGACGCTATGGCACTAAAATGTGCTGTGGAACTCCGCATAGCCGATATCATACACTCCCACGGTGGACCAATCACGTTGTCCCAGCTGGCTGCCTCCTTGGAGGAATCTCCCTCCCCAAATATTCCCTACCTCTTCCGCATCATGAGATCGCTGGTTCGCAAGAAGATCTTCACCGCTCATCATCCATCTAACGGTGGGGATACCCTCTACGGGTTGACAGAGGCGTCCAAGTGGCTCCTACATGGGTCACAGTTCAGCCTCGCTCCAATGGTCATCCTGGAGAACCATCCAAGTCATCTGGCTCCGTGGCAACTTCTGAGCCAGTCTGTGAGAGATGGCGGGGTCGCGTATGAGAAGGCTCATGGGTACGGGATTTGGGACTTCGCATCCAAGAACCCAGAGTTCAACAAGCTTTTCAACGATGGCATGGCGTGCATGGTGAAGTTCATCATGGAAGCGATCCTATCTGAGTATAAAGATGGGTTCGGCAGCATAGGATCATTAGTGGACGTGCATGGGAGGTGGCACTGGTGGTGTTATAACTGA 636 0.5126 MASMKGTPTLLSEAYLKSQALILETLFSFVDAMALKCAVELRIADIIHSHGGPITLSQLAASLEESPSPNIPYLFRIMRSLVRKKIFTAHHPSNGGDTLYGLTEASKWLLHGSQFSLAPMVILENHPSHLAPWQLLSQSVRDGGVAYEKAHGYGIWDFASKNPEFNKLFNDGMACMVKFIMEAILSEYKDGFGSIGSLVDVHGRWHWWCYN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0749 211 Pfam Dimerisation domain 33 82 IPR012967 GO:0046983
Glsi04g0749 211 SUPERFAMILY "Winged helix" DNA-binding domain 12 113 IPR036390 -
Glsi04g0749 211 Gene3D - 9 109 IPR036388 -
Glsi04g0749 211 PANTHER O-METHYLTRANSFERASE 16 203 IPR016461 GO:0008168
Glsi04g0749 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 201 IPR029063 -
Glsi04g0749 211 Gene3D Vaccinia Virus protein VP39 111 204 IPR029063 -
Glsi04g0749 211 Pfam O-methyltransferase domain 133 203 IPR001077 GO:0008171
Glsi04g0749 211 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 211 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0749 Glsi-ChrGlsi04 5306528 5307163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0749 33 203 Monolignol Biosynthesis Gene Families AT5G54160 32.386 7.34e-24 95.5