Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0748 ATGGAAGGCACACAAACACTACTGTCAGAGGCTTCCCTAAAGAGCCAAGCATTTATCTTGGACACCCTTTTCGGTTTTGTGGATTCTATGGCACTAAAATGTGCCGTGGAGCTCCGCATAGCAGATATCATCCACTCCCACGGTGGCCCAATCACATTGTCCCAGCTGGCTACCTCCTTGGAGGAATCTCCCTCCCCAAATATGCCCAACCTCTTCCGCATCATGAGATCGCTGGTCCGCAAGAAGATCTTCACCGCGCATCATCCATCCGGCAGCGGAGACACTCTCTACGGGCTGACAGAGGCGTCGCAGTGGCTCTTACATGGATCCCAGTTCAGCCTCGCTCCAATGGTCATCATGGAGAACCATCCACTTCAACTGGATCCGTGGCACCTCCTGACAAATCACCACCCAGGAGTTACTCATGTCGGAGGTGACATGTTTCAGGCCATTCCCCTGGCTGATGCTTGTCTTCTCGAGTGGATTCTACACGATTGGAGTGATGAGGATTGCATAAAGATTCTGCTGAACTGCAAAAAGGCAGTGGCAGAGAAGAAAGGGAAGATTATTATTGTGGAGATAGTGTTGGAAGCAGAGGGTAGTGGAGTTTTTGACGAGACAAGAATGACATATGATCTGCTTATGATGGCACATACAACAGGAGGGAAGGAGAGGACAGAAGTTGAATGGGGTAAGTTATTAGAGGAAGCAGGTTTCTCTGGTTACAATATTATCAAACTCCCCATGTTACCATCCATTATTGAGGCATACCCTTTTTGA 780 0.4872 MEGTQTLLSEASLKSQAFILDTLFGFVDSMALKCAVELRIADIIHSHGGPITLSQLATSLEESPSPNMPNLFRIMRSLVRKKIFTAHHPSGSGDTLYGLTEASQWLLHGSQFSLAPMVIMENHPLQLDPWHLLTNHHPGVTHVGGDMFQAIPLADACLLEWILHDWSDEDCIKILLNCKKAVAEKKGKIIIVEIVLEAEGSGVFDETRMTYDLLMMAHTTGGKERTEVEWGKLLEEAGFSGYNIIKLPMLPSIIEAYPF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0748 259 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Glsi04g0748 259 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 258 IPR016461 GO:0008168
Glsi04g0748 259 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Glsi04g0748 259 Pfam O-methyltransferase domain 129 240 IPR001077 GO:0008171
Glsi04g0748 259 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 257 IPR029063 -
Glsi04g0748 259 Gene3D Vaccinia Virus protein VP39 136 244 IPR029063 -
Glsi04g0748 259 Gene3D - 4 106 IPR036388 -
Glsi04g0748 259 PANTHER O-METHYLTRANSFERASE 15 130 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0748 Glsi-ChrGlsi04 5280855 5282276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0748 91 255 Monolignol Biosynthesis Gene Families AT1G77520 41.317 1.12e-29 113