Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0743 ATGGGGTGTTGTGTCTCAACAAGCAGTCGTAGTACTTGTAGTAGCAGGAGCAACGGAGACACAATCTCTCCATCTTGTTTGGAAATAGGATTCTGTGGGCAAAAGAGAACAAGGAGAACGTTCTCCGATCATGTTGTTGCTCTGCAGCATTTACCATCCCTACCTAACAGAATTTTCACTAATGGAAAGAGCCGGACTTCTTGTATATTTACACAGCAAGGACGTAAGGGTATCAATCAGGATGCCATGATTGTGTGGGAAGACTTCATTTCAGAAGATGTGATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCACGTTGTTGCACGCAATGTGAGGGACACCTTGCCAATAAAACTACTTTCATTTTTGCACTCTTGTGAATCAAAGAGAAATGGGTCAGGTAAAGCTTGTTTCAAAGGGAACACTGATGGTGGAGACTATGAGAAGGATTGCTCTCCTGACGATATACTGAATTCTGTATGGAGAGAGGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTAAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACCGCTGTCACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCTATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGATAGCAATGATTCCATGGTGGCCATTCAGTTGACTGTCGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAACGGTGCAAGGGCAGAGTATTTGCCCTGCAAGATGAGCCTGAAGTGCCTAGAGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCACGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAATTTTCTCATCGGCTGCTTACAGACAGAGATCAGTTCATTGTTCTTGCCTCCGATGGGGTCTGGGATGTGTTGAGCAATGAAGAAGTAGTTGAGATAGTATCTTCAGCACCGACACGGTCATCAGCAGCAAGGATTCTGGTGGATTCAGCTGCTCGAGAGTGGAAACTTAAATATCCAACTTCAAAGATGGATGACTGTGCTGTTGTCTGCCTATTTCTGGATGGGAAAATGGACTCGGAATCTGATTACGAGGAACAAGGATTTTCTTCTGCTACCATCCAGAGCAACCATTCAGGCAATCCAGTTGAATCGGATGATGGTCAAAAGTCAGAGCCATCCCTGCAAAGGAACTTCACCGTGAGATCCTCGGAAGAAAACGAGACTTATGGAGGACAACCTGTTGAGGTTGAAGATGGAACGACTTCAACCGCTGAAGATCAAAACTGGTCAGGTTTGGAAGGTGTCACTCGCGTAAACTCGCTGGTCCAGCTTCCCAGATTTTCTGAGGAAAGGCCAAACACTTGA 1410 0.4539 MGCCVSTSSRSTCSSRSNGDTISPSCLEIGFCGQKRTRRTFSDHVVALQHLPSLPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFISEDVIFCGVFDGHGPHGHVVARNVRDTLPIKLLSFLHSCESKRNGSGKACFKGNTDGGDYEKDCSPDDILNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPVESDDGQKSEPSLQRNFTVRSSEENETYGGQPVEVEDGTTSTAEDQNWSGLEGVTRVNSLVQLPRFSEERPNT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0743 469 ProSiteProfiles PPM-type phosphatase domain profile. 66 368 IPR001932 -
Glsi04g0743 469 CDD PP2Cc 72 368 IPR001932 -
Glsi04g0743 469 Gene3D - 57 370 IPR036457 -
Glsi04g0743 469 PANTHER PROTEIN PHOSPHATASE 66 366 IPR015655 GO:0004722|GO:0006470
Glsi04g0743 469 SMART PP2C_4 50 366 IPR001932 -
Glsi04g0743 469 MobiDBLite consensus disorder prediction 378 449 - -
Glsi04g0743 469 SUPERFAMILY PP2C-like 57 370 IPR036457 -
Glsi04g0743 469 MobiDBLite consensus disorder prediction 379 449 - -
Glsi04g0743 469 Pfam Protein phosphatase 2C 136 345 IPR001932 -
Glsi04g0743 469 FunFam probable protein phosphatase 2C 52 57 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0743 Glsi-ChrGlsi04 5228860 5231494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0743 1 469 PP2C-type Phosphatase Gene Family AT1G03590 69.474 0.0 639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0743 04 5228860 5231494 Glsi04g0743 04 5228860 5231494 ECH